Transcript Information: S_Transcript_532288.p3


Annotated TAIR IDAT2G15790.1
Annotated Gene Namepeptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase
Annotated Gene Symbol(s)SQN, CYP40
Annotation TypeHomolog
Chromosome Positionchr2:6878144-6880743 | Reverse length=361
E-Value9E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.76474141480404
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_532288.p3 GENE.S_Transcript_532288~~S_Transcript_532288.p3 ORF type:internal len:174 (+),score=25.82,TPR_2|PF07719.13|7.3,TPR_2|PF07719.13|5.6,TPR_2|PF07719.13|2.9e-05,TPR_11|PF13414.2|9.9e-05,TPR_11|PF13414.2|0.079 S_Transcript_532288:3-521(+)
ATCATTGTGGACTGTGGTGAGCTCACCGGTGACGCTGCCCTCGCCGCCGACGTCAAGGCCCCCGATGCCATCGGCGATCAGTACGAGGACTACCCAGATGACTGCGCCACTCCTCCCGACGCCAAGGAGACACTCAAGATTGCTACCGCCTGCAAGGACTTTGGCAACAAGGCCTTCAAGGCGGGCGACTTCCAGACTGGCCTCGACAAGTACCAGAAGGGTCTGCGCTACCTCAATGAGGAGCCTGAACTCGACAACGAGCCCGCCGAGGTTAAGACGGAGCTCCAGGCCCTCCGTTTCTCCCTCAACAACAACTCCGCCTTGCTCAACATTAAGCTCGAGAACTGGGAGGATGCCGCTAGATGCGCGGGTTACGCGCTCGACGTCGCCGGCATTAAGGACACCGATCGCGCCAAGGCCCTCTACCGCCGCGGCTTTGCCAGTGTTCGTCTCAAAGATGACGAGAGCGCCCTCAAGGACCTCGAGGAGGCCCACAAGCTCGTGCCTGAGGACAAGGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_532288.p3 GENE.S_Transcript_532288~~S_Transcript_532288.p3 ORF type:internal len:174 (+),score=25.82,TPR_2|PF07719.13|7.3,TPR_2|PF07719.13|5.6,TPR_2|PF07719.13|2.9e-05,TPR_11|PF13414.2|9.9e-05,TPR_11|PF13414.2|0.079 S_Transcript_532288:3-521(+)
IIVDCGELTGDAALAADVKAPDAIGDQYEDYPDDCATPPDAKETLKIATACKDFGNKAFKAGDFQTGLDKYQKGLRYLNEEPELDNEPAEVKTELQALRFSLNNNSALLNIKLENWEDAARCAGYALDVAGIKDTDRAKALYRRGFASVRLKDDESALKDLEEAHKLVPEDKV

Click here to download the sequence:
Link to NCBI Protein BLAST