Transcript Information: S_Transcript_53240.p1


Annotated TAIR IDAT5G58005.1
Annotated Gene NameCytochrome c oxidase, subunit Vib family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23482234-23482757 | Forward length=116
E-Value1.9E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.604575008595
Replicate 228.58570125278
Replicate 328.065033170696
Condition 2: 8 Hour
Replicate 117.98750313706
Replicate 224.317226782312
Replicate 327.617924288193
Condition 3: 24 Hour
Replicate 120.515194930297
Replicate 226.408267402005
Replicate 325.441366530378


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53240.p1 GENE.S_Transcript_53240~~S_Transcript_53240.p1 ORF type:complete len:115 (+),score=15.67,COX6B|PF02297.13|1.4e-14 S_Transcript_53240:135-479(+)
ATGTCTACTATGGAGGTTTACGCTGATAAAGTCCATACGGATGTACTCTTCAATGCGAGACAGGCTTGTTACAAGGCAAGAGATGCATCATACGCATGCTTGGAGAGAGAATCGAACAAGAAAGCCACTGAAATCGCTTCTGTCGGCCTTCTTTACCCTTCCGAATGCAACAAGTCTAGGGCTGAATTTCAGAGACATTGTCGACCTTCATGGGTGAAGCATTTCGACAGACAATACTGTGCGAAGAAGAAGAGGGCTCAGAGATTGTTGGATGACAACGAGTCCAGGAGAGGTCCGTTAACTCTTCCACAACCTTACACTTTCAAGCCTCCTACTACTTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53240.p1 GENE.S_Transcript_53240~~S_Transcript_53240.p1 ORF type:complete len:115 (+),score=15.67,COX6B|PF02297.13|1.4e-14 S_Transcript_53240:135-479(+)
MSTMEVYADKVHTDVLFNARQACYKARDASYACLERESNKKATEIASVGLLYPSECNKSRAEFQRHCRPSWVKHFDRQYCAKKKRAQRLLDDNESRRGPLTLPQPYTFKPPTTS*

Click here to download the sequence:
Link to NCBI Protein BLAST