Transcript Information: S_Transcript_532505.p2


Annotated TAIR IDAT4G19490.1
Annotated Gene NameVPS54
Annotated Gene Symbol(s)ATVPS54, VPS54
Annotation TypeHomolog
Chromosome Positionchr4:10616017-10622934 | Forward length=1034
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.21975100623692
Condition 3: 24 Hour
Replicate 10
Replicate 20.4672950840484
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_532505.p2 GENE.S_Transcript_532505~~S_Transcript_532505.p2 ORF type:3prime_partial len:97 (+),score=-5.80,Vps54|PF07928.8|1.3e-16 S_Transcript_532505:23-289(+)
ATGGGCCGCCGCATCGGTGAGCTCCTGCGCGCCTACAGCGCATGCAGCCAGCGGCAGGTGCTGGGCGCGGGCGCGATGGCGACCGCCGGCCTGCGCAGCATCACGGCGCGCCACATGGCGGTGTGCAGCCAGGCGCTGCTGCTGCTCGAGGCTCTGATGCCGTATCTGCGGCACCTGGTGCTCGCGGGCGTGCCCGCGGCGGCTGTGGCGCAGCTGTCGTCGCTGCTGGACACGGCCTCTGAGAGCATCGTGCTGCAGCGGCAGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_532505.p2 GENE.S_Transcript_532505~~S_Transcript_532505.p2 ORF type:3prime_partial len:97 (+),score=-5.80,Vps54|PF07928.8|1.3e-16 S_Transcript_532505:23-289(+)
MGRRIGELLRAYSACSQRQVLGAGAMATAGLRSITARHMAVCSQALLLLEALMPYLRHLVLAGVPAAAVAQLSSLLDTASESIVLQRQQ

Click here to download the sequence:
Link to NCBI Protein BLAST