Transcript Information: S_Transcript_53393.p1


Annotated TAIR IDAT3G53720.1
Annotated Gene Namecation/H+ exchanger 20
Annotated Gene Symbol(s)ATCHX20, CHX20
Annotation TypeOrtholog
Chromosome Positionchr3:19905826-19910027 | Reverse length=842
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.457610579793
Replicate 227.043836525101
Replicate 329.757298098079
Condition 2: 8 Hour
Replicate 17.2741822186049
Replicate 26.2586275949174
Replicate 37.0355374303558
Condition 3: 24 Hour
Replicate 162.103797604548
Replicate 251.834778869094
Replicate 338.900748242001


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53393.p1 GENE.S_Transcript_53393~~S_Transcript_53393.p1 ORF type:complete len:815 (+),score=113.63,Na_H_Exchanger|PF00999.17|1.6e-59 S_Transcript_53393:262-2706(+)
ATGGCACATCCTATGAATATAAGCTCCATTAAGACCTCCTCTAGTGGGGTTTGGCAAGGTGATAATCCCCTCCATTATGCCTTCCCTTTGCTCATTATTCAAACCATCCTCGTCGTTGGTATCAGCCGCCTTATTGCCTTTTTTCTTAGACCCCTTCGCCAGCCTAAAGTCATTGCCGAGATAGTCGGTGGAATAATGCTAGGACCATCAGCGTTGGGGAGAAACCAGAACTTCCTAAACTGGATATTCCCTTCATGGAGTTCCCCCATCCTTGAGTCCGTTGCCAGCATTGGTCTCCTCTTCTTCCTCTTTCTCGTCGGTCTCGAGCTCGACCTCAGCTCTATCCGCCGCACTGGCCGGAGAGCTTTTCCGATCGCCTTGGCCGGAGTTTCTCTCCCCTTCTCCTTTGCTGCAATCGTAACCCTAGTCCTCCGCCACCACGCCACCACCACGGCTGCCGCTAACCACCCTGGTTTCGGCCAAACCCTAGTCTTCCTAGGTGTGGCTTTGTCCATCACAGCCTTCCCTGTGCTAGCTCGCATCCTAGCCGAGCTCAAACTCCTAACCACTGACGTAGGGGAGACTTCTATGGCGGCCGCCGCCTTCAATGACGTGGCCGCCTGGGTCTTATTAGCCTTAGCCGTTGCCCTAACAGGCAACAACTCAAACCATAGCCCTTTAACAACCGTGTGGATATTACTATCCACAGTGGCATTCGTGACCTTCATGCTCACACTGGTTAGGCCGGCCATGCGTTGGGTGGCCAAGCAGTGCTCGGCCACCCATGGCGTCATGGACGAGGCCTGGATCTGCTTGACCTTTGCTGGGGTCATGCTTTCAGGGTTCATGACGGACCTTATAGGGATCCATTCCATATTTGGGGCCTTTGTGTTTGGGTTATGCATCCCTAAGGAAGGAGATTTTGCATCTAGGTTGATCAAGAGAATTGAGGATTTTGTGTCTAGTTTGTTGTTACCTTTGTATTTTGCTTCTAGTGGGATGAAGACCAATGTGTCCAAAATCCAAGGTCTCCAAGCGTGGGGCCTACTTGTCTTGGTCACATCAACTGCCTGTGTTGGGAAAATATTAGGGACATTTGTAGTGGCAATGATGTGTATGATCCCCGCTAGAGAGTCCTTGACTTTGGGCTTGTTGATGAATACCAAAGGCTTGGTGGAGCTCATTGTTCTCAACATTGGCAGGGAAAAGAAGGTCCTTGACGATGAAATGTTCACCATACTAGTAATAATGGCACTCTTCACCACCTTCATGACCACTCCAATGGTGTTGGGGATCTACAAACCATTGTTCGGAAAAGCCGCTCGAATCCACAACCGCCATCTTAAGCAAGAATCGTCGACGAAATCCGACGTCGAAAAGGTTCAAGGCTTGAGGGTGCTTTGTTGTGTACATGGTGCAGGAAATGTGCCATCCATGGTTAACCTCATTGAGCTAATTAGAGGTTCCAACACTTCTCCTCTTAAACTTTATGCCATGCATTTGGTGGAGTTCACTGATCGTCCCTCGTCCATCATCATGGTCCAACGTGTTCGTAAGAATGGTTTGCCCTTTTTCAACCGTCTCACCAGAGGAAAGTCACACAACAAGATAGCAATTGCATTTGAGGCATATGCAGAAGCAAGTCATGTAACAGTGCGCCCAACCACAGCAATTTCAGGCCTACAAACCATGCACGAAGATATTTGCCATGTGGCAGAATATAAAAGGACGACGATAATTATATTGCCCTTCCACAAACAATGGATCAGAGGATCAGATGATAATGGTGATCAGCAGGTCATTGAAAATAATGCAGGAAATGGTTGGAGGCATGTAAATGAGAGGGTGCTGCAAAATGCTCCTTGTTCTGTTGCAATTTTTGTGGACCGTGGATTTGGTGGTGGTACCAAATTTCACCAACATTATAATAATAATAATGATGATAATGTCCCAAAAAGAATTTGTGTCCCGTTTTTAGGAGGGCCAGATGATCATGAAGCACTAGAGCTTGGAGGAAGGATGTCTGAAAGTGTTCTGTCTGAGGTCTCTGTACTTCGATTTGTTCATCAGAACTTTGCTTCCACAATTGATCAAACTACAGAACAGCTGGATCCTGATGAAGCAGCACTGGCAGAATTTCACCAGAGATGGGGGAAATCAGTTGAGTGCACAGAGACAAGTATTGGAAGCAACATTGTGAATCAAGTGCTGGAAATTGAGAAAAGTGGTGAGTATGACCTCATGATAGTAGGGAAAGGGAGATATCCTGCAGCTGTAGAGTCCAAGCTTGCAAATCAACCAGCTGAATTTCCAGAGTTGGGACCAATTGGGGATGCATTGGCCTCGACGAAGGGGGTCTTATCTTCAGTGCTTGTGATCAAACAACATGACCTTGCCCTCGACGATGAAGCTTCAATATCTAAGAGAGTCACTGAAGCAGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53393.p1 GENE.S_Transcript_53393~~S_Transcript_53393.p1 ORF type:complete len:815 (+),score=113.63,Na_H_Exchanger|PF00999.17|1.6e-59 S_Transcript_53393:262-2706(+)
MAHPMNISSIKTSSSGVWQGDNPLHYAFPLLIIQTILVVGISRLIAFFLRPLRQPKVIAEIVGGIMLGPSALGRNQNFLNWIFPSWSSPILESVASIGLLFFLFLVGLELDLSSIRRTGRRAFPIALAGVSLPFSFAAIVTLVLRHHATTTAAANHPGFGQTLVFLGVALSITAFPVLARILAELKLLTTDVGETSMAAAAFNDVAAWVLLALAVALTGNNSNHSPLTTVWILLSTVAFVTFMLTLVRPAMRWVAKQCSATHGVMDEAWICLTFAGVMLSGFMTDLIGIHSIFGAFVFGLCIPKEGDFASRLIKRIEDFVSSLLLPLYFASSGMKTNVSKIQGLQAWGLLVLVTSTACVGKILGTFVVAMMCMIPARESLTLGLLMNTKGLVELIVLNIGREKKVLDDEMFTILVIMALFTTFMTTPMVLGIYKPLFGKAARIHNRHLKQESSTKSDVEKVQGLRVLCCVHGAGNVPSMVNLIELIRGSNTSPLKLYAMHLVEFTDRPSSIIMVQRVRKNGLPFFNRLTRGKSHNKIAIAFEAYAEASHVTVRPTTAISGLQTMHEDICHVAEYKRTTIIILPFHKQWIRGSDDNGDQQVIENNAGNGWRHVNERVLQNAPCSVAIFVDRGFGGGTKFHQHYNNNNDDNVPKRICVPFLGGPDDHEALELGGRMSESVLSEVSVLRFVHQNFASTIDQTTEQLDPDEAALAEFHQRWGKSVECTETSIGSNIVNQVLEIEKSGEYDLMIVGKGRYPAAVESKLANQPAEFPELGPIGDALASTKGVLSSVLVIKQHDLALDDEASISKRVTEAV*

Click here to download the sequence:
Link to NCBI Protein BLAST