Transcript Information: S_Transcript_53402.p1


Annotated TAIR IDAT4G34030.1
Annotated Gene Name3-methylcrotonyl-CoA carboxylase
Annotated Gene Symbol(s)MCCB
Annotation TypeOrtholog
Chromosome Positionchr4:16301298-16303949 | Forward length=587
E-Value1.7E-240
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5224707981352
Replicate 28.6040072566343
Replicate 312.214796883256
Condition 2: 8 Hour
Replicate 118.212533778467
Replicate 216.133076034313
Replicate 313.606848253289
Condition 3: 24 Hour
Replicate 111.707715334828
Replicate 211.603476515123
Replicate 37.8028982691209


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53402.p1 GENE.S_Transcript_53402~~S_Transcript_53402.p1 ORF type:complete len:459 (+),score=94.50,Carboxyl_trans|PF01039.18|8.2e-109 S_Transcript_53402:279-1655(+)
ATGTCAAGAATTTTTGGGTTTCTCGGAAGGAAAACATCGAGATTATCATCATTTCCAAATTCATGGCGGAAAATTTCATCAATCGATTATCATCAAAGGAGAGAAATGTGTTTGGGAGTTCTTCCGGATACCGTCGATCGAAATTCCGATGGATTCACTCGCAACTCGCTTCACATGCAGGGTTTGCTCTCTCAGCTCCATTCTCACATCTCCAAGGTTTTGGATGGTGGAGGACCGGAAGCTGTGAAGAGGAACAGAAGTAGGAGTAAGCTTTTGCCTAGAGAGAGAATCGAACGCCTTATTGATCCTGGTTCTTCCTTTCTTGAGCTTTCTCAGCTTGCAGGTCATGAACTGTATGAAGATAATCTTCCTTCTGGTGGAACAATAACAGGAATTGGGCCTGTTCATGGGAAACTCTGTATGTTCGTGGCTAACGATCCAACTGTCAAGGGGGGAACTTATTATCCCATAACAGTGAAGAAGCATTTGAGGGCACAGGAGATTGCTGCTCAGTGCAAACTACCATGCTTGTATCTTGTTGATAGTGGTGGTGCTTTCCTTCCGAAACAGGCTGAAGTCTTTCCTGACAAGGAGAATTTTGGCAGAATATTCTATAATCAAGCGACAATGTCTGCTGTAGGCATACCTCAAATTGCTTTAGTTTTAGGTTCATGTACTGCTGGGGGTGCTTATATACCTGCGATGGCTGATGAGAGTGTCATGGTGAAAGGAAATGGAACTATATTTCTTGCTGGGCCTCCACTTGTGAAGGCTGCTACCGGCGAAGAAATATCTGCAGAGGATTTAGGAGGCGCCAGTGTGCACTGCAAGATATCTGGTGTTTCTGATTATTTTGCTGAAGATGAACTGCATGCTCTAGCTACAGGGAGGAACATTGTTAAGAACTTATATATGGCTGGTCAAAGAGAATTACCTAGTGCAATGCATTATGTTACAGCAGGATTTAAGGAACCTCTATATGATGTGAAGGAGCTTAGATCTATTGCCCCAATGGATCACAAACGACAGTTTGATGTTCGATCTGTTATTGCTCGTATTGTTGATGGTAGTGAATTTGATGAATTCAAGAAATTGTATGGCACTACTCTTGTAACAGGCTTTGCGAGAATTTTTGGACAGCCTGTTGGGATCCTTGGAAATAATGGAGTATTGTTTCACGAGTCCGCACTCAAAGGGGCCCACTTCATTGAACTATGCACTCAGCGTAAAATACCCTTGATTTTCCTTCAGAACATTACTGGCTTTATGGTATGCAAGTCTCTATACAAAACTATAAATGTCACTGTTGGAAGATATTTGCCTTTTGATTTATTTATCAATTTAATAGCCAAAAGAGTTGAAGATCTTGTGGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53402.p1 GENE.S_Transcript_53402~~S_Transcript_53402.p1 ORF type:complete len:459 (+),score=94.50,Carboxyl_trans|PF01039.18|8.2e-109 S_Transcript_53402:279-1655(+)
MSRIFGFLGRKTSRLSSFPNSWRKISSIDYHQRREMCLGVLPDTVDRNSDGFTRNSLHMQGLLSQLHSHISKVLDGGGPEAVKRNRSRSKLLPRERIERLIDPGSSFLELSQLAGHELYEDNLPSGGTITGIGPVHGKLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCKLPCLYLVDSGGAFLPKQAEVFPDKENFGRIFYNQATMSAVGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKISGVSDYFAEDELHALATGRNIVKNLYMAGQRELPSAMHYVTAGFKEPLYDVKELRSIAPMDHKRQFDVRSVIARIVDGSEFDEFKKLYGTTLVTGFARIFGQPVGILGNNGVLFHESALKGAHFIELCTQRKIPLIFLQNITGFMVCKSLYKTINVTVGRYLPFDLFINLIAKRVEDLVV*

Click here to download the sequence:
Link to NCBI Protein BLAST