Transcript Information: S_Transcript_53403.p2


Annotated TAIR IDAT4G34030.1
Annotated Gene Name3-methylcrotonyl-CoA carboxylase
Annotated Gene Symbol(s)MCCB
Annotation TypeOrtholog
Chromosome Positionchr4:16301298-16303949 | Forward length=587
E-Value6.6E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8927175255631
Replicate 23.6771315929191
Replicate 34.4102194982523
Condition 2: 8 Hour
Replicate 19.4264406474284
Replicate 26.6467086538318
Replicate 35.8695812245601
Condition 3: 24 Hour
Replicate 14.5905914581683
Replicate 22.2992272613686
Replicate 32.0104528149006


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53403.p2 GENE.S_Transcript_53403~~S_Transcript_53403.p2 ORF type:3prime_partial len:138 (+),score=25.55,Carboxyl_trans|PF01039.18|2.4e-28 S_Transcript_53403:2972-3382(+)
ATGGTGATGGCTGTTTCATGTGCAAAGGTTCCAAAAATCACCGTAATAATCGGAGGCAGTTTTGGTGCTGGAAACTATGCAATGTGTGGACGTGCATATAGTCCCAATTTTATGTTCTTCTGGCCGAATGCAAGAATATCCATAATGGGAGGTGCACAGGCCGCAGGTGTTCTATCACAAATAGAAAGGGGCAACAAGAAAAGGCGAGGAGTTCAGTGGACTACTGAAGAAGAAGAAGTGTTCAAAGCCAAGGTTGAGGAGGGCTATGATAAAGAAGGCAGTCCATATTACTCCACTGCTAGACTTTGGGATGATGGTGTTATCGATCCAGCAGATACCAGAAAAATTATAGGTCTATGTGTCAATGCTGCAATGAACCACGCCCCAGAAGAAACAAAGTATGGTGTATTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53403.p2 GENE.S_Transcript_53403~~S_Transcript_53403.p2 ORF type:3prime_partial len:138 (+),score=25.55,Carboxyl_trans|PF01039.18|2.4e-28 S_Transcript_53403:2972-3382(+)
MVMAVSCAKVPKITVIIGGSFGAGNYAMCGRAYSPNFMFFWPNARISIMGGAQAAGVLSQIERGNKKRRGVQWTTEEEEVFKAKVEEGYDKEGSPYYSTARLWDDGVIDPADTRKIIGLCVNAAMNHAPEETKYGVF

Click here to download the sequence:
Link to NCBI Protein BLAST