Transcript Information: S_Transcript_53405.p1


Annotated TAIR IDAT4G34030.1
Annotated Gene Name3-methylcrotonyl-CoA carboxylase
Annotated Gene Symbol(s)MCCB
Annotation TypeOrtholog
Chromosome Positionchr4:16301298-16303949 | Forward length=587
E-Value2.6E-259
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.221138132325
Replicate 215.214030049639
Replicate 316.193621927064
Condition 2: 8 Hour
Replicate 120.237842695638
Replicate 221.330143935881
Replicate 323.962604735533
Condition 3: 24 Hour
Replicate 119.858984991449
Replicate 213.668640241167
Replicate 316.16224131503


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53405.p1 GENE.S_Transcript_53405~~S_Transcript_53405.p1 ORF type:complete len:451 (+),score=99.91,Carboxyl_trans|PF01039.18|2.8e-120 S_Transcript_53405:279-1631(+)
ATGTCAAGAATTTTTGGGTTTCTCGGAAGGAAAACATCGAGATTATCATCATTTCCAAATTCATGGCGGAAAATTTCATCAATCGATTATCATCAAAGGAGAGAAATGTGTTTGGGAGTTCTTCCGGATACCGTCGATCGAAATTCCGATGGATTCACTCGCAACTCGCTTCACATGCAGGGTTTGCTCTCTCAGCTCCATTCTCACATCTCCAAGGTTTTGGATGGTGGAGGACCGGAAGCTGTGAAGAGGAACAGAAGTAGGAGTAAGCTTTTGCCTAGAGAGAGAATCGAACGCCTTATTGATCCTGGTTCTTCCTTTCTTGAGCTTTCTCAGCTTGCAGGTCATGAACTGTATGAAGATAATCTTCCTTCTGGTGGAACAATAACAGGAATTGGGCCTGTTCATGGGAAACTCTGTATGTTCGTGGCTAACGATCCAACTGTCAAGGGGGGAACTTATTATCCCATAACAGTGAAGAAGCATTTGAGGGCACAGGAGATTGCTGCTCAGTGCAAACTACCATGCTTGTATCTTGTTGATAGTGGTGGTGCTTTCCTTCCGAAACAGGCTGAAGTCTTTCCTGACAAGGAGAATTTTGGCAGAATATTCTATAATCAAGCGACAATGTCTGCTGTAGGCATACCTCAAATTGCTTTAGTTTTAGGTTCATGTACTGCTGGGGGTGCTTATATACCTGCGATGGCTGATGAGAGTGTCATGGTGAAAGGAAATGGAACTATATTTCTTGCTGGGCCTCCACTTGTGAAGGCTGCTACCGGCGAAGAAATATCTGCAGAGGATTTAGGAGGCGCCAGTGTGCACTGCAAGATATCTGGTGTTTCTGATTATTTTGCTGAAGATGAACTGCATGCTCTAGCTACAGGGAGGAACATTGTTAAGAACTTATATATGGCTGGTCAAAGAGAATTACCTAGTGCAATGCATTATGTTACAGCAGGATTTAAGGAACCTCTATATGATGTGAAGGAGCTTAGATCTATTGCCCCAATGGATCACAAACGACAGTTTGATGTTCGATCTGTTATTGCTCGTATTGTTGATGGTAGTGAATTTGATGAATTCAAGAAATTGTATGGCACTACTCTTGTAACAGGCTTTGCGAGAATTTTTGGACAGCCTGTTGGGATCCTTGGAAATAATGGAGTATTGTTTCACGAGTCCGCACTCAAAGGGGCCCACTTCATTGAACTATGCACTCAGCGTAAAATACCCTTGATTTTCCTTCAGAACATTACTGGCTTTATGGTCGGCTCAAGAGCTGAGGCAAACGGCATAGCAAAAGCTGGTGCAAAAATGGTGATGGCTGTTTCATGTGCAAAGGTAAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53405.p1 GENE.S_Transcript_53405~~S_Transcript_53405.p1 ORF type:complete len:451 (+),score=99.91,Carboxyl_trans|PF01039.18|2.8e-120 S_Transcript_53405:279-1631(+)
MSRIFGFLGRKTSRLSSFPNSWRKISSIDYHQRREMCLGVLPDTVDRNSDGFTRNSLHMQGLLSQLHSHISKVLDGGGPEAVKRNRSRSKLLPRERIERLIDPGSSFLELSQLAGHELYEDNLPSGGTITGIGPVHGKLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCKLPCLYLVDSGGAFLPKQAEVFPDKENFGRIFYNQATMSAVGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKISGVSDYFAEDELHALATGRNIVKNLYMAGQRELPSAMHYVTAGFKEPLYDVKELRSIAPMDHKRQFDVRSVIARIVDGSEFDEFKKLYGTTLVTGFARIFGQPVGILGNNGVLFHESALKGAHFIELCTQRKIPLIFLQNITGFMVGSRAEANGIAKAGAKMVMAVSCAKVS*

Click here to download the sequence:
Link to NCBI Protein BLAST