Transcript Information: S_Transcript_53483.p1


Annotated TAIR IDAT5G03670.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36420.1); Has 700 Blast hits to 624 proteins in 104 species: Archae - 0; Bacteria - 18; Metazoa - 333; Fungi - 60; Plants - 73; Viruses - 24; Other Eukaryotes - 192 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:947311-949898 | Forward length=516
E-Value1.1E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.202177050997
Replicate 215.899500166954
Replicate 39.7440366757485
Condition 2: 8 Hour
Replicate 110.058331870227
Replicate 28.1516857391716
Replicate 39.3634391301234
Condition 3: 24 Hour
Replicate 17.0310454959605
Replicate 27.1111149682871
Replicate 38.8328212187957


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53483.p1 GENE.S_Transcript_53483~~S_Transcript_53483.p1 ORF type:complete len:494 (+),score=127.99,DUF4378|PF14309.2|8.8e+03,DUF4378|PF14309.2|1.9e+03,DUF4378|PF14309.2|3.2e-06 S_Transcript_53483:433-1914(+)
ATGGCTCAAAAGCACTTGAAAGAGCTACTGAAAGAGGATCAAGAGCCCTTTCAACTAAAGGATTATATTGCAGATAGAAAATGTCAGGTGAAGAAACAAATCCAAGTGAAGAAGGCAAAATCCATGTCAAAATGCTCTTCATTTTTCACCAAAAATGCTTGTTTTTTCTCTTTACAACAAAACTCCCCTGACTATCGCAAATCTCCCCTGTATGATTTTGCAACTAAAAGCCCCTGTAAGAGCCCAAACAGAGTCTTCCTTCATGTTCCTGCTAAAACTGCTGCTCTTCTTTTGGAAGCTGCAATGAGAATCCAAAAGCAAACTAAACCCAAAACCCAAGTGAAAGGCTCTGGGTTTGGGTTGTTTGGGTCTATGCTTAAAAGATTGACTCATAGGAGCAAGGCACAGAAGCTCAAAGGCAATGAAACAGGGGAGTTCAAAACAGAGGAAAACAGAGGAGGTGTAAATAATAAACTTGCAACTATTAGTACTTCTATTACTACCTCAACTTCTTCATATTCATATTCATCGTCTTCATCTTCTTCATGTTCCCGTAATGGGAGACAAAGTAGCTTGGATTCGGAGAGTTCAAGTAGTGGAAGGTCCTTTAATGGTGATGATGAAGATGAAGATGATGGGTTTGAGTTTGCTAATGTTTTGAGAGGAGAAAATGGTGGACTTTGTTTAAGCCCTTTTCGTTTTGCCCTTCATAATAAAAGTCCTTCTCCTGGTCGCCTTTCCCCTGTTTTCTCTTCTCCGGCCAAGTCCCCTTCTTGCCGCAAAATTGAGGATAATTTGTACTATGAGCAAGAAAACTCAGGGAAGTTCCGAGAAGAAGAAGATGAGGAAGACAAGGAACAGAACAGCCCTGTTTCAGTCCTCGACCCTCCATTCGAAGATGATTACGATGGACAGGAAGAAGAAGAAGGAGGAGGATATGATCTGGAATGCAGCTACGCATTTGTACAAATCACAGCAGCAAAGCAACATCTCCTGCACAAGCTTCACAGGTTCGAGAAATTGGCGGAATTGGACCCAATTCAGCTCGAAAAGAGATTGATCGAAGATGAAAATGAAGTAGATCAAGCAAAGCGCTACGAAGAATACGAATATGAATCATTCACATTCGACGAGCAAAGGCAAGTGGATGAGTTCATTCATGACATTATAAGAAAATCAGGGTTCCAAGACCTCAAGAAGCCCGGAATCAAGAGGCTAGTATCGGATTTGATACTCGAGGAGGAAGAAGACAATGCCTTAGATGAAAATGATGACGAATTACTCATTAAAAGGGTGTGCAAGAGATTGGAGTCATGGAAGGAAGTCGAAGCAAACACAATCGATATGATGGTGGAAATGGATCTGAGAAGGGAAAGTGGTGAGTGGAAGAAACCACAAGAGAAAATTGGTGAGGCTGCAAATGATATTGAATTTGCCATTTTTGCAGCTTTGGTTGAGGAATTAGTACAAGATCTATGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53483.p1 GENE.S_Transcript_53483~~S_Transcript_53483.p1 ORF type:complete len:494 (+),score=127.99,DUF4378|PF14309.2|8.8e+03,DUF4378|PF14309.2|1.9e+03,DUF4378|PF14309.2|3.2e-06 S_Transcript_53483:433-1914(+)
MAQKHLKELLKEDQEPFQLKDYIADRKCQVKKQIQVKKAKSMSKCSSFFTKNACFFSLQQNSPDYRKSPLYDFATKSPCKSPNRVFLHVPAKTAALLLEAAMRIQKQTKPKTQVKGSGFGLFGSMLKRLTHRSKAQKLKGNETGEFKTEENRGGVNNKLATISTSITTSTSSYSYSSSSSSSCSRNGRQSSLDSESSSSGRSFNGDDEDEDDGFEFANVLRGENGGLCLSPFRFALHNKSPSPGRLSPVFSSPAKSPSCRKIEDNLYYEQENSGKFREEEDEEDKEQNSPVSVLDPPFEDDYDGQEEEEGGGYDLECSYAFVQITAAKQHLLHKLHRFEKLAELDPIQLEKRLIEDENEVDQAKRYEEYEYESFTFDEQRQVDEFIHDIIRKSGFQDLKKPGIKRLVSDLILEEEEDNALDENDDELLIKRVCKRLESWKEVEANTIDMMVEMDLRRESGEWKKPQEKIGEAANDIEFAIFAALVEELVQDLC*

Click here to download the sequence:
Link to NCBI Protein BLAST