Transcript Information: S_Transcript_53500.p1


Annotated TAIR IDAT1G65295.1
Annotated Gene Nameunknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01015.1); Has 90 Blast hits to 90 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:24251567-24252054 | Forward length=115
E-Value2.4E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 163.626485711696
Replicate 276.712572886761
Replicate 352.890375320211
Condition 2: 8 Hour
Replicate 144.48917635126
Replicate 239.472169726414
Replicate 337.731500358243
Condition 3: 24 Hour
Replicate 133.646142387812
Replicate 238.684781828593
Replicate 336.673432382152


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53500.p1 GENE.S_Transcript_53500~~S_Transcript_53500.p1 ORF type:complete len:174 (+),score=17.63 S_Transcript_53500:156-677(+)
ATGCAAGAGTGTCAACTTGCGCTATTCATAAACCCTACAATCATCCATCCCCTTTCCAACCATTTCCCCCCCTTCTCCCCAAACAAGCCCTTAGAAAAAAACCCTCATTTCAGATCTACAGAACAACAGTACATGCTAAAAATGCCTTCTTTTAATCAATGGGTTACTATTTTTTCTCTGGTATTGCTGCTATTCTCTCCAACCCATTTCAGTTCCAATCAATTAAAGCTTGCCCATGCAAAGGGATTGTGTTCTTCAACATCAGGGAATGAGACAGAGGTTGGGATGAAATTGTACCCATTAATTGATCACAAGAAAGTGAAGAACATGTTGATGATGAATGAAACAAGAAGAAAACTTGGAAGTTTCCAGATTTGTGCACCTTGCACTTGTTGTGGAGCTAAAGGCTATTGTTTACCTTCACCTTGTTGTTATGCCATCAATTGCAACATACCAAACAGGCCCTTTGGTTTCTGCTCTTTCACTCCCAAAACTTGTAATTGTTTTGGATGCCATCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53500.p1 GENE.S_Transcript_53500~~S_Transcript_53500.p1 ORF type:complete len:174 (+),score=17.63 S_Transcript_53500:156-677(+)
MQECQLALFINPTIIHPLSNHFPPFSPNKPLEKNPHFRSTEQQYMLKMPSFNQWVTIFSLVLLLFSPTHFSSNQLKLAHAKGLCSSTSGNETEVGMKLYPLIDHKKVKNMLMMNETRRKLGSFQICAPCTCCGAKGYCLPSPCCYAINCNIPNRPFGFCSFTPKTCNCFGCHL*

Click here to download the sequence:
Link to NCBI Protein BLAST