Transcript Information: S_Transcript_53520.p1


Annotated TAIR IDAT2G24530.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:10422597-10423820 | Forward length=407
E-Value1.9E-132
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.61991498221
Replicate 210.166701126266
Replicate 39.8565691658198
Condition 2: 8 Hour
Replicate 111.59979663331
Replicate 211.212494211359
Replicate 39.9237675310602
Condition 3: 24 Hour
Replicate 112.972021075175
Replicate 29.0978245995314
Replicate 311.682419617572


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53520.p1 GENE.S_Transcript_53520~~S_Transcript_53520.p1 ORF type:complete len:421 (+),score=94.58,SAGA-Tad1|PF12767.3|1.7e-63 S_Transcript_53520:930-2192(+)
ATGCAGCCGGAAAAGAGTTCACGAATGGATACAGGGGAATTGAAGGCTCAGTTGTTTAAGAAGGTCGGACCGGAGAGGTTCAAGAGGTACTTCTATTGTTTGAATAGATTTATAAATCAGAAGGTGAGTAAGAGTGAGTTTGACAAGCTGTGTTATCGGATACTCGGGAGGGAAAACCTTCCTTTGCATAATCAGATAATAAGGGCCATTCTCAAGAATGCTTGTGGTGCTAAGGCCCCTCCTCCTCTTCCTGTTCATGACGCGGGTCCCACAAAGCTGGCTGCTGTGGCTGGAAAGGGTTCTTCCACTGTAGACGAAGGGCATGGTCAGGGTGCATCTATGACCCACAATCAGAGTTCAGTGGCGCCTATTTGGTCGAATGGGGCTGTTTTGCCAATGTCCCCACGAAAGGGCAGGTCTGCGATACGTGACAGGAAGCTCAGAGATAGGCCGAGTCCTCTTGGTCCTAATGGGAAGGCGGATTCTGCTTCACATCAGTCAACTGCAACAGAAGACAGTGGTGGGAAGACTGTAGACAATGGTGATTTGACACCTTGTGATTATCAAAGGCCGTTGCAGCAGCCACGAGGATTTGCTGAGCAGCCTGAGAATGAAGAAAGGTTGATGATGAAGAAACCTGGAGATGTTCCCAGTTTGGTTCGAAGCAAAGACCAGAATAATGTGGCAGCCGTTGAAGATGGGGAAGAGGTGGAACAGGACAGCCATGTGAAATTCTCGAGAGGCCCTCTACTTGCTCCTCTGGGAATTCCATTTTGCTCAGCAAGCACTGGTGGAGCCCGCAAGGCGTTACCTGTGACACACATTGGTGACTACGTTAGCTGCTTTGATACGGCCGGATTGTCTGATTCAGAAACACTCAGGAGACGGATGGAGCAGATTGCAGCAGCACAGGGCGTGGGAGGGGTTACCATGGAATGTGCCAACACCTTGAATAATATGTTGGATATATATTTGAAGCGATTGATCAGGTCTTGTGTAGACTTAGTTGGAGCAAGAACTACTAGTGACACGTCAAAGTATCCTGTCCAGAAACAGCAAATTCATGGCAAGCTTATCAACGGTCTCTGGCCAAGTAAACATCTACATATGCAAAGTGGTGGTGGTTCTGTAGAAGATCAGAGAGTTCATCATTCCATATCTTTGCTTGATTTCAAGGTTGCAATGGAGTTAAATCCTCAACAACTTGGAGAAGACTGGCCGTTACTGTTGGAGAAAATTTCCATGCAGGCATTTGAGGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53520.p1 GENE.S_Transcript_53520~~S_Transcript_53520.p1 ORF type:complete len:421 (+),score=94.58,SAGA-Tad1|PF12767.3|1.7e-63 S_Transcript_53520:930-2192(+)
MQPEKSSRMDTGELKAQLFKKVGPERFKRYFYCLNRFINQKVSKSEFDKLCYRILGRENLPLHNQIIRAILKNACGAKAPPPLPVHDAGPTKLAAVAGKGSSTVDEGHGQGASMTHNQSSVAPIWSNGAVLPMSPRKGRSAIRDRKLRDRPSPLGPNGKADSASHQSTATEDSGGKTVDNGDLTPCDYQRPLQQPRGFAEQPENEERLMMKKPGDVPSLVRSKDQNNVAAVEDGEEVEQDSHVKFSRGPLLAPLGIPFCSASTGGARKALPVTHIGDYVSCFDTAGLSDSETLRRRMEQIAAAQGVGGVTMECANTLNNMLDIYLKRLIRSCVDLVGARTTSDTSKYPVQKQQIHGKLINGLWPSKHLHMQSGGGSVEDQRVHHSISLLDFKVAMELNPQQLGEDWPLLLEKISMQAFEE*

Click here to download the sequence:
Link to NCBI Protein BLAST