Transcript Information: S_Transcript_53556.p1


Annotated TAIR IDAT4G32940.1
Annotated Gene Namegamma vacuolar processing enzyme
Annotated Gene Symbol(s)GAMMA-VPE, GAMMAVPE
Annotation TypeOrtholog
Chromosome Positionchr4:15900557-15903161 | Reverse length=494
E-Value2.2E-269
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 199.518758125945
Replicate 2106.90946923862
Replicate 3119.74842667508
Condition 2: 8 Hour
Replicate 1166.28676096987
Replicate 2141.94243044764
Replicate 3158.18153042334
Condition 3: 24 Hour
Replicate 163.477116355434
Replicate 251.958718323329
Replicate 353.931706172863


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53556.p1 GENE.S_Transcript_53556~~S_Transcript_53556.p1 ORF type:complete len:499 (+),score=98.88,Peptidase_C13|PF01650.14|2.8e-113 S_Transcript_53556:169-1665(+)
ATGACCGGAGAGACGATGATCCGATGCACAGGCGGTGTACCGTTAGCAGTGCTCCTGGTGCTGAGCTGTTTCGCTGTTGGCCGTCAGATTAGCGATGACTTCATCAGGCTACCGTCTGATCATCCTTCATTCCTTGATCATGCTTTTCCTCGTAACCACAAAGATGATGATGTTGTTGGAACTAGATGGGCTGTTTTGATTGCTGGCTCTAATGGGTACTGGAATTACAGACACCAGGCTGATGTTTGTCATGCTTACCAAATTTTGAAGAAAGGTGGTTTGAAGGATGAAAATATTATTGTTTTCATGTATGACGACATTTCTTACGACAAGGAAAACCCCAGGCGTGGGGTGATTATAAATAGCCCACATGGAGACGATGTCTATGCGGGAGTTCCTAAGGATTACACTGGGGTAAATGTAACTGCTGACAACTTTTTGGCAGCAATACGTGGAGACAAATCAGCTATTACTGGCGGAAGTGGAAAGGTGGTTGATAGTGGCCCTAATGATCACATCTTCATTTTTTATTCAGACCATGGTGGTCCTGGTGTGCTCGGGATGCCTACCTATCCATACCTTTATGCTGATGACCTGATAGATACGCTAAAGAAAAAGCATGCTTCTGGAACATACAAGAGCTTGGTATTTTATCTTGAAGCCTGTGAATCTGGAAGCATTTTTGAGGGCCTTCTCCCAGAAGGTCTAAATATCTATGCTACCACTGCTGCAAATTCTGAAGAGAGTAGCTGGGGAACTTATTGCCCTGGGGAGTATCCAAGTCCTCCTGAAGAATATGAAACCTGTCTGGGTGACTTGTATAGTGTTGCTTGGATGGAAGACAGTGAGCGACATAACTTGCGAGCAGAAACCTTGAAGCAGCAATATGAACTGGTTAAGACAAGAACGGCAAATTCAGACTCATATTATGGCTCACATGTCATGGAGTTCGGTGATAAAAGTCTTGGCAAAGACGTTCTCTACTTGTACATCGGCACAAATCCTGCTAATGAGAATTTTACAGGCATGGGGGAAAATTCATTGCGCCCTAGGTCTTCTAAAGCTATTAACCAGCGGGATGCTGACCTTGTTCATTTCTGGGACAAGTTTCGGAAGGCTCCTGATGGCTCTGTTAGAAAGATGGAAGCTCAGAGGCAGTTTTTGGAGGCAATGTCACACAGAGAGCACTTGGATAACGGCATCAAACTTGTTGGAAAGCTTTTGTTTGGTCTCAAAAAGGGTCCAGAGGTGCTGCAGGCTGTCCGACCTTCTGGGGAACCCCTTGTCGATGACTGGCAATGCCTGAAAACACTGGTAAGAGCATTTGAGACACACTGTGGATCTCTATCACAGTACGGAATGAAGCATATGCGCTCCATTGCAAATATCTGCAATGCTGGGATCACAGCCGAGCAGATGGCTGAGGCCTCAGCTCAGGCTTGCCCTAGCGTTCCTTCTGGCCCTTGGAGCTCACTGCACAGAGGATTCAGTGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53556.p1 GENE.S_Transcript_53556~~S_Transcript_53556.p1 ORF type:complete len:499 (+),score=98.88,Peptidase_C13|PF01650.14|2.8e-113 S_Transcript_53556:169-1665(+)
MTGETMIRCTGGVPLAVLLVLSCFAVGRQISDDFIRLPSDHPSFLDHAFPRNHKDDDVVGTRWAVLIAGSNGYWNYRHQADVCHAYQILKKGGLKDENIIVFMYDDISYDKENPRRGVIINSPHGDDVYAGVPKDYTGVNVTADNFLAAIRGDKSAITGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTYPYLYADDLIDTLKKKHASGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTAANSEESSWGTYCPGEYPSPPEEYETCLGDLYSVAWMEDSERHNLRAETLKQQYELVKTRTANSDSYYGSHVMEFGDKSLGKDVLYLYIGTNPANENFTGMGENSLRPRSSKAINQRDADLVHFWDKFRKAPDGSVRKMEAQRQFLEAMSHREHLDNGIKLVGKLLFGLKKGPEVLQAVRPSGEPLVDDWQCLKTLVRAFETHCGSLSQYGMKHMRSIANICNAGITAEQMAEASAQACPSVPSGPWSSLHRGFSA*

Click here to download the sequence:
Link to NCBI Protein BLAST