Transcript Information: S_Transcript_53562.p1


Annotated TAIR IDAT3G21630.1
Annotated Gene Namechitin elicitor receptor kinase 1
Annotated Gene Symbol(s)CERK1, LYSM RLK1
Annotation TypeOrtholog
Chromosome Positionchr3:7615543-7618530 | Reverse length=617
E-Value4E-236
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.234792015636
Replicate 216.743443855137
Replicate 316.532808722192
Condition 2: 8 Hour
Replicate 120.221162986796
Replicate 222.480449846716
Replicate 325.075438849226
Condition 3: 24 Hour
Replicate 113.22004275968
Replicate 214.595788037842
Replicate 314.814890160287


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53562.p1 GENE.S_Transcript_53562~~S_Transcript_53562.p1 ORF type:complete len:618 (+),score=122.58,Pkinase_Tyr|PF07714.13|3.3e-45,Pkinase|PF00069.21|5.2e-43,LysM|PF01476.16|0.042,LysM|PF01476.16|0.012,LysM|PF01476.16|0.19 S_Transcript_53562:214-2067(+)
ATGTTGGGTCACCAAGGTTCAGCAAGATTAAGAAACTTCTTAGTTCTTGCATTTCTTCTTCAACTTAGTACCCTCGTTTTCACAGCTGAATCAACCTGTAAAAAGGGCTGCTCCTTAGCTTTAGCTTCTTACAATGTTTCGAGACACGACACCGTTACCACCATAGCTGATGCTTTCAACATTACATTTGCCTTATTTCTCAGTTACAACCCTTCTGTACCTGATGAAAACAGGATCCAATCTTTTGTCCCAGTAAATGTCCCCTTCTCTTGTGATTGCATTAATGGGGAGTTTTTAGGTCATATGTTTCAGTACCAGGTTCAAAAGGGTGATACTTATACAACAATTGCTGAGACTTATTATTCTAATCTTACTACACCCACTTGGATTCAGAAATTCAATAGCTATAACCCCAATAGAATACCTGATAATGCTGTTGTTAATGTAACTGTTAATTGCTCCTGTGGGGATCCAAGTATTAGCAAGGATTATGGGTTGTTCATGACATACCCACTTCAACCTGGGGATACTTTGAAGTCTGTTGCTCAGCAACATAATTCAACAACAAATTGGCTCCAAAGTTATAATCCTGGTGTTAATTTTAGTGCTGGGAGTGGCTTGGTGTTTGTTCCTGCAAAAGATAAAAACGGGGAGTACCCTCCTTTTCCGTCAAGCACAGGGCTTTCTGGTGGAGCTATTGCTGGTATAGCTGTAGCAGTTGTAGCTGTCCTGAGCATTTTGGCTGTTCTGTATTATATATTCGTCAGAAGAAAGAAAGCAAGGGAAAGTTTTCTGCTTGGCAAATCTGGAGAACTGGCAACACAAACTGGTTTTGGAAGTTCTCGTCGAACTGGAGGTTCATCAGCTTATGCCAGAAGTACGTCTGGACACATGGGTGTTACTGTTGACAAATCAGTGGAGTTCTCATACGATGAGCTTGCACAAGCAACAGATAACTTCAGTATGGCTAACAAGATTGGTTCAGGTGGTTTTGGAGCTGTGTATTACGCAGAGCTAAGAGGCGAGAAAGCAGCTATCAAGAAGATGGACATGCAAGCATCAAAAGAATTTCTTGCTGAGTTAAATGTCTTGACTCGTGTTCATCACTTAAACCTGGTCCGCTTGATTGGATATTGTGTTGAGCAATCTCTTTTCTTGGTTTATGAATTTGTGGAGAATGGCAATTTAAGCCAGCATTTGCGTGGCTCTGGAAGGGATCCACTACCCTGGCCCACTAGAATACAAATTGCGCTGGATTCAGCAAGGGGGCTCGAGTACATTCATGAGCACACAGTTCCTGTCTATATTCATCGTGACATTAAATCTGCCAATATTCTGATAGACAAGAGTTTCCATGCCAAGGTTGCAGATTTTGGGTTGACCAAGCTGACTGACGTTGGAGGTGTTTCTGGTCCCACACGTCTTGTGGGAACATTTGGATATATGCCTCCAGAGTATGCACAGTATGGTGAGGCATCCCCAAAGGTAGATGTATATGCGTTTGGGGTTGTCCTGTATGAGCTTATATCTGCTAAGGAAGCTGTGGTGAGGGGAAATGTTTCACTTCCTGATTCAAAGGGCCTTGTTGGATTGTTTGAGGATGCTCTTAATCAGCCTGATCAAAATGAGATAAAAAAACTGGTGGATCCTAGGCTCGGTGACAACTACCCACTGAACTCAGTTCTCAAGATGTCGCAACTGGCAAAGGCATGCACTCATGAGAGTCCCCAGCTAAGACCGAGCATGAGATCAGTTGTAGTTGCTCTGATGACTCTATCGTCCACAACAGAAGAGTGGGATGTCAATACCTTTTATGAAAACCAGGGTCTTGCAAAACTAATGTCTGCAAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53562.p1 GENE.S_Transcript_53562~~S_Transcript_53562.p1 ORF type:complete len:618 (+),score=122.58,Pkinase_Tyr|PF07714.13|3.3e-45,Pkinase|PF00069.21|5.2e-43,LysM|PF01476.16|0.042,LysM|PF01476.16|0.012,LysM|PF01476.16|0.19 S_Transcript_53562:214-2067(+)
MLGHQGSARLRNFLVLAFLLQLSTLVFTAESTCKKGCSLALASYNVSRHDTVTTIADAFNITFALFLSYNPSVPDENRIQSFVPVNVPFSCDCINGEFLGHMFQYQVQKGDTYTTIAETYYSNLTTPTWIQKFNSYNPNRIPDNAVVNVTVNCSCGDPSISKDYGLFMTYPLQPGDTLKSVAQQHNSTTNWLQSYNPGVNFSAGSGLVFVPAKDKNGEYPPFPSSTGLSGGAIAGIAVAVVAVLSILAVLYYIFVRRKKARESFLLGKSGELATQTGFGSSRRTGGSSAYARSTSGHMGVTVDKSVEFSYDELAQATDNFSMANKIGSGGFGAVYYAELRGEKAAIKKMDMQASKEFLAELNVLTRVHHLNLVRLIGYCVEQSLFLVYEFVENGNLSQHLRGSGRDPLPWPTRIQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKSFHAKVADFGLTKLTDVGGVSGPTRLVGTFGYMPPEYAQYGEASPKVDVYAFGVVLYELISAKEAVVRGNVSLPDSKGLVGLFEDALNQPDQNEIKKLVDPRLGDNYPLNSVLKMSQLAKACTHESPQLRPSMRSVVVALMTLSSTTEEWDVNTFYENQGLAKLMSAR*

Click here to download the sequence:
Link to NCBI Protein BLAST