Transcript Information: S_Transcript_5357.p1


Annotated TAIR IDAT5G35690.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: WLM (InterPro:IPR013536), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G55915.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:13865027-13868117 | Reverse length=603
E-Value9.6E-170
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.857176087993
Replicate 230.736203090589
Replicate 330.186541123382
Condition 2: 8 Hour
Replicate 125.628720201756
Replicate 222.472170830936
Replicate 324.151588168275
Condition 3: 24 Hour
Replicate 138.791811041593
Replicate 230.320046877176
Replicate 335.175138161395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5357.p1 GENE.S_Transcript_5357~~S_Transcript_5357.p1 ORF type:complete len:669 (+),score=166.96,WLM|PF08325.6|3.9e-41,PUB|PF09409.6|2.4e+03,PUB|PF09409.6|5.1e-14 S_Transcript_5357:237-2243(+)
ATGGCGCGACATCAATGCATTATTAGGGTTTCTGTTATATGGAGGAACAAGAAGTTTGTAGTCGAACTAAATTCAGAGGCCTCTCTTAAAGAGTTGGGAGAGGAGCTGCTTAATTTGACCGATGTTAAAGCAGACACTATAAGATTGATCATCCCTCAGTCTTCCACTAAAAGCTCCAAGATGTTTGTACCTTTTTCTGTTGAGCATTCCATTCTTAAGCTGGAAGATATTGGGATCATGGAGGGAAAGCCTTTAAGAATGATGGGAGTTTCTGGACATGAGGTTGATCAGCTTCTTAAGGATGCAAAAGCAAATTTGAGAATTGCTGGATTTGAGGATGAAGAGAAAAGGATGAAGCAACGGATATCTAGGGGATTCCAACTCCCAATCAAACTTCCTGAAGGACCTTACATCTTTTGCGGTTTTCGCACACTTGAACTTCCTGGAATAGAGTTAAATCCTCCTCCTTCGGAGGCATTGAAGAGAATGCACATGCTTGCTGCTGACCCAGGAATTGTTGCCATCATGAGAAAGCATCGTTGGCTAGTTGGGATCATGACAGAGATGGCACCTGAAGGCTATGTTGGTATTAGTCCTGTATGCCTTCTTGGTTTGAACAAGAATCATGGAGAAGAAATATCTCTTCGTCTTCGGACAGATGACCTCAAGGGTTTTAGGAAGTATGAAATTATCAAGAAAACTTTGCTGCATGAACTAGCTCACATGGTCTACTCAGAGCATGATTCAAACTTCTATGCCCTTGATAGACAGCTTAATGAGGAAGCTTTTGCTTTAGATTGGACAAGATCCAGAAGTAATACCTTGTCTAATTCCCGTTTTTTGGGACATGATGATATGGACGAAGAGTATGAATCAGGTGGCAACTTATCCCACAAGCTTGGAGGAGAAACTTCACATATGACTGCCTCTGCTCGTGCAGCTTCTGTGGCTGCTGCTTATTATCGTTTGGCTGATTCTTCTACCATTCATCAACAGTCTAATGACCAAGATTCTGACAATCACAAAGCTGAAGCTCATAGGAACTCTCAATCACTCGAATCTGTGAAGGACGAGCTGGTCACAGGAGGCCAGCCTGATCACTGCTCTCCTATAAAGAATATGCTGGAACCTGATCCGGACGATGCTGAGGCCAGAGATAATATGAACTTAGAGTCTCAAGGTGTAACTCATATAGAGTCTGACTGTGCTGACACTGAGATGACTGAAGTTGTCACAAATTTCACTGCTAATGGAAGGTTTGATGGTGCAAATTTGTTGGAGGAACCTGACCCTGATGATTCAAAAGCTTCTGAGAAGTGTGTAACCGGTTCTGTTGATACTCAGTCTGTGCAAATTGAGACTAATTCCAGTAGGATGGGGATTAATGAAGAACCTGATCCAGATGATTTGGAAGCAGAAGATAATGCAGGGAAGTCCACAAGAGCTAATGCAGTTAGTGAGAGCAGAAAAAATCAGTCACAACTGAGAACGTTCAATCTGGAACCAGACCCTTATGATCCTCAAGACAATAGATTAGGGGGGCCACAGTCTAATCCAGATGGTAAGTCTGAAAACTCGATGCTAACTTTGGGAGACATGACCGAGGAGCCAGATCCAGATGATCAAGAATTAAGAAGAATTCAAGACCCCGTAGCTGCTTTTTGTGACCGAATTACCAAAGCCATTGAGAAGTTGCATGATGAACTCAGACCCTCAGAGGCCATTGTAGTCTTACAAACTCTGTTGAGAATTATCAGTAATATAACTGGAAATCCTAATGAACTGAAGTACAAAAGACTTCGCAAGGCAAATCCCGTATTCCAAAGGAGCATTGCATATAATAAAGTGGCAATGGACATTCTCGCCTTGATTGGTTTTGGTGAAGATATTGTCACTGATGAAAGTGGAAAGTTGGAAACCTACCTGGTGTTGAGACGGAATGACCCTGCGATGCTCTGGCTTGCAAAATCCATCCTTGAGACATCCCTTAGTAACTGGTCCAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5357.p1 GENE.S_Transcript_5357~~S_Transcript_5357.p1 ORF type:complete len:669 (+),score=166.96,WLM|PF08325.6|3.9e-41,PUB|PF09409.6|2.4e+03,PUB|PF09409.6|5.1e-14 S_Transcript_5357:237-2243(+)
MARHQCIIRVSVIWRNKKFVVELNSEASLKELGEELLNLTDVKADTIRLIIPQSSTKSSKMFVPFSVEHSILKLEDIGIMEGKPLRMMGVSGHEVDQLLKDAKANLRIAGFEDEEKRMKQRISRGFQLPIKLPEGPYIFCGFRTLELPGIELNPPPSEALKRMHMLAADPGIVAIMRKHRWLVGIMTEMAPEGYVGISPVCLLGLNKNHGEEISLRLRTDDLKGFRKYEIIKKTLLHELAHMVYSEHDSNFYALDRQLNEEAFALDWTRSRSNTLSNSRFLGHDDMDEEYESGGNLSHKLGGETSHMTASARAASVAAAYYRLADSSTIHQQSNDQDSDNHKAEAHRNSQSLESVKDELVTGGQPDHCSPIKNMLEPDPDDAEARDNMNLESQGVTHIESDCADTEMTEVVTNFTANGRFDGANLLEEPDPDDSKASEKCVTGSVDTQSVQIETNSSRMGINEEPDPDDLEAEDNAGKSTRANAVSESRKNQSQLRTFNLEPDPYDPQDNRLGGPQSNPDGKSENSMLTLGDMTEEPDPDDQELRRIQDPVAAFCDRITKAIEKLHDELRPSEAIVVLQTLLRIISNITGNPNELKYKRLRKANPVFQRSIAYNKVAMDILALIGFGEDIVTDESGKLETYLVLRRNDPAMLWLAKSILETSLSNWSN*

Click here to download the sequence:
Link to NCBI Protein BLAST