Transcript Information: S_Transcript_53586.p1


Annotated TAIR IDAT5G37570.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:14924494-14926146 | Reverse length=550
E-Value4E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52080237250842
Replicate 20.56128427445732
Replicate 30.36091460046185
Condition 2: 8 Hour
Replicate 10.66772259310005
Replicate 21.0945131428438
Replicate 30.6257098122793
Condition 3: 24 Hour
Replicate 10.98323350349054
Replicate 20.48787069929515
Replicate 30.69101491520866


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53586.p1 GENE.S_Transcript_53586~~S_Transcript_53586.p1 ORF type:complete len:511 (-),score=83.81,PPR_2|PF13041.2|0.0026,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|0.0092,PPR_2|PF13041.2|4e-07,PPR_2|PF13041.2|2.2e-06,PPR_2|PF13041.2|8.5e-11,PPR_2|PF13041.2|0.3,PPR_2|PF13041.2|1.7e-09,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|1.5,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|0.0028,PPR|PF01535.16|2,PPR|PF01535.16|5.3e-07,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|5.2e-09,PPR|PF01535.16|19,PPR|PF01535.16|0.043,PPR|PF01535.16|0.00042,PPR|PF01535.16|0.17,PPR|PF01535.16|1.4,PPR_1|PF12854.3|7.3e+02,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|4.7e-05,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|2.2e-05,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|0.089,PPR_1|PF12854.3|0.00034,PPR_1|PF12854.3|2.7e+02,PPR_1|PF12854.3|0.00015,PPR_3|PF13812.2|6.1e+03,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|4.9e-05,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|3.7e-06,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|0.0044,PPR_3|PF13812.2|0.55,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|1.3,TPR_14|PF13428.2|10,TPR_14|PF13428.2|3,TPR_14|PF13428.2|1.9e+02,TPR_14|PF13428.2|1.3e+02 S_Transcript_53586:1165-2697(-)
ATGAAACTAACAGAGCTATCAGCTAGCTCTCTCTTGAAAAATTGCAAATCCATCTCTCAACTGAAACAAATACATGCACATATCTTACGTTTCAATCTCCTAAATTTCTCCTCTGTAATTTCATCTCTTATCCCACTCTACGTTTCTCTCTCTCCTTTCCAAATTCATCTCTTGTTATCCTCACTCTCTCATTATCCAACATTATCCCTCTGCAATTACTCAATCAGAGCCTTCTCTAAAACCCCATCTCTTTGCTTTGAATCATTGAATTTGTACCTTCAAATGGTCCGTACTAATATAAAACCTGATAATTACACTTACCCATTTCTTTTTAAATCTTGTGCTGCTCTTTGTGCACTTAATCAGGGTACTGAGGCTCATGGTCGAGCTTTCAAAACTGGGTTTTTTTCCTTTGTGGAGGTCTTCAATGCATTGGTTGACATGTATGGGAAATGTAGTGAACTGTGTTGTGCACGCCAATTGTTCGATGAAATGCCTCAAAGAGATGTGGTTTCTTATAATGCACTTCTGGGAGCACACGCGAGGTTAGGAGAGGATATGATGAGTGCCCAGATGGTTTTTGATCGAATGCCGGGGAGAAATGTGATTTCTTGGAATGCAATGATTGTGGGTTATGTGAATTCTGGTGATTTGGATTCAGCTCGGGCTGTCTTTGATAAGATGTCTGAGAGGAATGTTGTTACTTGGACGACGATGTTGGTGGGTTATACCAAAAATGGGATGATGGATTCAGCTAGGGTCCTTTTCGACGTGATGCCTGAGAAGTCTTTAGTTTGTTGGACAGCTATGATTTCTGGGTATGCTCAAAATGGACGGCCAAATGAAGCTTTGGCGGTTTTTCATAGAATGGAGAGAGCAAAAATGAGGCCTGATGCTTTTGTTATGACCTCTATCATCTCTGCATTGGCACAAATAGGGCGTCCTGATTTGGCCAATTGGATCACTACTGTAGCGGAACAGGAATGCATTGAGCGGAACGAGAGAGTTCTTACAGCCTTGCTTGACATGCATGCAAAATGTGGCAATATTGAACAAGCATGTCAACTGTTTGAGGAAATCCCTCAGCCTGATGTATTTCCTTATAGTGCATTGATAACAGGGCTTGCTTCACATGGACACAGCATGAGAGCGCTTGAAGTTTTTCACAAAATGCAAATGGCTAATGTAGAACCTGATTATATAACCTTTGTTGGTGTACTGAATGCATGTAGCCATACAGGACTTGTTGAAGATGGCTTGAAATATTGGGATAGCATGATTAATAATTACAGGATTGAACCAGATGCTGATCATTATGCTTGCATTGTTGATATGCTTGGGCGTGCTGGTAGACTTGATCAAGCATACAAAATGGTCCAGAGTATGCCAATGGGACCTCGTCCTGGAGCTTTAGGTGCTCTCCTTGCTGCCTGTATTTCCGGTAGCAAGCCTGAAGTGTTGCATACCATGATGGCTGATACTGCACCAAAAGCATTAAACACCTGGTCTATCGTGCTTCCTCTAATTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53586.p1 GENE.S_Transcript_53586~~S_Transcript_53586.p1 ORF type:complete len:511 (-),score=83.81,PPR_2|PF13041.2|0.0026,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|0.0092,PPR_2|PF13041.2|4e-07,PPR_2|PF13041.2|2.2e-06,PPR_2|PF13041.2|8.5e-11,PPR_2|PF13041.2|0.3,PPR_2|PF13041.2|1.7e-09,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|1.5,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|0.0028,PPR|PF01535.16|2,PPR|PF01535.16|5.3e-07,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|5.2e-09,PPR|PF01535.16|19,PPR|PF01535.16|0.043,PPR|PF01535.16|0.00042,PPR|PF01535.16|0.17,PPR|PF01535.16|1.4,PPR_1|PF12854.3|7.3e+02,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|4.7e-05,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|2.2e-05,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|0.089,PPR_1|PF12854.3|0.00034,PPR_1|PF12854.3|2.7e+02,PPR_1|PF12854.3|0.00015,PPR_3|PF13812.2|6.1e+03,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|4.9e-05,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|3.7e-06,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|0.0044,PPR_3|PF13812.2|0.55,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|1.3,TPR_14|PF13428.2|10,TPR_14|PF13428.2|3,TPR_14|PF13428.2|1.9e+02,TPR_14|PF13428.2|1.3e+02 S_Transcript_53586:1165-2697(-)
MKLTELSASSLLKNCKSISQLKQIHAHILRFNLLNFSSVISSLIPLYVSLSPFQIHLLLSSLSHYPTLSLCNYSIRAFSKTPSLCFESLNLYLQMVRTNIKPDNYTYPFLFKSCAALCALNQGTEAHGRAFKTGFFSFVEVFNALVDMYGKCSELCCARQLFDEMPQRDVVSYNALLGAHARLGEDMMSAQMVFDRMPGRNVISWNAMIVGYVNSGDLDSARAVFDKMSERNVVTWTTMLVGYTKNGMMDSARVLFDVMPEKSLVCWTAMISGYAQNGRPNEALAVFHRMERAKMRPDAFVMTSIISALAQIGRPDLANWITTVAEQECIERNERVLTALLDMHAKCGNIEQACQLFEEIPQPDVFPYSALITGLASHGHSMRALEVFHKMQMANVEPDYITFVGVLNACSHTGLVEDGLKYWDSMINNYRIEPDADHYACIVDMLGRAGRLDQAYKMVQSMPMGPRPGALGALLAACISGSKPEVLHTMMADTAPKALNTWSIVLPLIS*

Click here to download the sequence:
Link to NCBI Protein BLAST