Transcript Information: S_Transcript_53611.p2


Annotated TAIR IDAT3G46960.1
Annotated Gene NameRNA helicase, ATP-dependent, SK12/DOB1 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17291004-17298067 | Reverse length=1347
E-Value4.9E-131
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35366114598247
Replicate 20.7329830417779
Replicate 30.735258581406
Condition 2: 8 Hour
Replicate 10.49593930970077
Replicate 20.74325078537298
Replicate 30.49571738616236
Condition 3: 24 Hour
Replicate 10.65316927380514
Replicate 20.75295055070922
Replicate 31.173118344424


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53611.p2 GENE.S_Transcript_53611~~S_Transcript_53611.p2 ORF type:5prime_partial len:301 (+),score=55.53 S_Transcript_53611:1-903(+)
GCTGAAAGAGGTGTTGTTTGGGAGGAAGTTATTATAATGCTTCCACGTCACATCAATTTTGTTCTTCTTTCTGCTACAGTTCCAAATACAATAGAATTTGCTGACTGGATAGGTAGAACAAAACAAAAGACTATTCGTGTTACTGGGACCACCAAAAGACCTGTCCCCTTGGAGCACTGCCTGTTTTACTCTGGAGAACTTTATAGGATTTGTGAGAATGAAATTTTTATACCTCAGGGTCTGAAAGCTGCTAAAGAAGCATACAAGAAAAAGAATTCCAGTACAGTCAGAAGTGGCCCTGCAATGGGTTCTGGTGGAGCTCATGCTCAAAATCGTGAACAAGCTCATCGTGGAAAACAGAAGCATCCTGTGTCCCATCATTCTGGAAATTTAAATGCGAATGCTTCGGGGAACTTTATGAATGGAAACCAGAATAATTTCAGCTTGAGACGATCTGATGCTTCTTTGTGGTTGCAATTAGTGAACAAACTGTCAAAAAAATCACTTTTGCCTGTTATCGTATTTTGTTTTTCAAAGAATCGTTGTGATCGATCAGCTGATAGTATGACAAGTATGGACCTTACAAGTAATTCAGAGAAGAGTGAAATTCGTGTTTTCTGTGACAAAGCATTTTCACGTCTGAAGGGGTCTGATCGAAATCTACCTCAGATTCTTAGAGTTCAAAGTCTTCTTCGTAGAGGAATTGGTGTACATCACGCTGGTTTGCTCCCGATTGTGAAAGAAGTAATTGAAATGCTTTTCTGCCGTGGTGTAATCAATGTATGGACAGCTCTTCTTGATGTTATGGTGATATTGGGCTCAAGTTGCTGGTGCTGTTTTCTACTGAGACATTTGCTATGGGGGTCAATGCTCCTGCCAGAACGGTGGTTTTTGATACTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53611.p2 GENE.S_Transcript_53611~~S_Transcript_53611.p2 ORF type:5prime_partial len:301 (+),score=55.53 S_Transcript_53611:1-903(+)
AERGVVWEEVIIMLPRHINFVLLSATVPNTIEFADWIGRTKQKTIRVTGTTKRPVPLEHCLFYSGELYRICENEIFIPQGLKAAKEAYKKKNSSTVRSGPAMGSGGAHAQNREQAHRGKQKHPVSHHSGNLNANASGNFMNGNQNNFSLRRSDASLWLQLVNKLSKKSLLPVIVFCFSKNRCDRSADSMTSMDLTSNSEKSEIRVFCDKAFSRLKGSDRNLPQILRVQSLLRRGIGVHHAGLLPIVKEVIEMLFCRGVINVWTALLDVMVILGSSCWCCFLLRHLLWGSMLLPERWFLIL*

Click here to download the sequence:
Link to NCBI Protein BLAST