Transcript Information: S_Transcript_53642.p2


Annotated TAIR IDAT5G19660.1
Annotated Gene NameSITE-1 protease
Annotated Gene Symbol(s)ATSBT6.1, S1P, ATS1P
Annotation TypeOrtholog
Chromosome Positionchr5:6642118-6646418 | Reverse length=1038
E-Value4.5E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.75796522505261
Replicate 23.2814908519088
Replicate 32.5096128215026
Condition 2: 8 Hour
Replicate 15.1963767544913
Replicate 22.3363006490854
Replicate 33.3053054830509
Condition 3: 24 Hour
Replicate 13.7329864192787
Replicate 21.4344184541992
Replicate 32.9532140600927


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53642.p2 GENE.S_Transcript_53642~~S_Transcript_53642.p2 ORF type:complete len:316 (+),score=44.29,Peptidase_S8|PF00082.18|1.3e-10 S_Transcript_53642:374-1321(+)
ATGGTCAAACCTCCAGCCACCTTCACCACCACCTTCTTTTTCTCTCTCCTCATCCTCATCTACTCTCTCTCTCCTCTTCGCTCTCCTCTAACCCTAACTAACCTCTCCAATTCCCTAACTTCTCCAAACAACAGCAATTACATCGTTCGCTTCGTCGAGTACCGAAATGCCGAAGATCACCGTAATTACCTCACAACTAACCTCAAATCCACCGCCTGGACCTGGATCGAACGCCGTAACCCTGCCGTCGAGTTTCCGACGGATTTCGCCGTCGTTTCGGTCGATGAATCGGTGAAAACGGCGGTGATTGGTGATATTGAGAGGTTGAGTCGAGTTAAGGATGTTTCGGTGGATTTTAGTTATACTAGGAGCTTGCTTGAGGGGAATTTGGAGAGAGAGAGTGGGTTTTGTGAGGTGAAGAAGACGGCTGGGAAGATGTTTACGAAGATGTCGTTTGAAGAGGAGGATGGAGAGGTTGGAGGTCACTGGAGTTCGCTGAGTAATCAGACGATTAGCTGGCAAAGGCATCTCTTGGGGAAGAGGCCTCAAGTGACATCCTTATTTGGAGCAGATGTCCTTTGGGCTAAGGGCTACACTGGTGCTAAAGTGAAAATGGCAATCTTTGATACTGGAATTAGGGCAGATCATCCACACTTCCGCAACATAAAGGAGCGGACAAATTGGACAAATGAAGATACATTGAATGACAATCTTGGTCATGGGACTTTTGTTGCTGGAGTTGTTGCTGGTCAAGACTCGGAGTGCCTGGGATTTGCACCGGACACTGAACTTTATGCTTTCCGTGTGTTTACTGATGCACAGGTACTTGATATTATGCCCCAGAGGATGATGGGAAGATTCCTTTTCCTGAAAAAAGGGATTTTATGCTTTATACTGCTTATATCTTGTTGGTTGTTACCCTGGTTTACAGAAACTGAAGTATTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53642.p2 GENE.S_Transcript_53642~~S_Transcript_53642.p2 ORF type:complete len:316 (+),score=44.29,Peptidase_S8|PF00082.18|1.3e-10 S_Transcript_53642:374-1321(+)
MVKPPATFTTTFFFSLLILIYSLSPLRSPLTLTNLSNSLTSPNNSNYIVRFVEYRNAEDHRNYLTTNLKSTAWTWIERRNPAVEFPTDFAVVSVDESVKTAVIGDIERLSRVKDVSVDFSYTRSLLEGNLERESGFCEVKKTAGKMFTKMSFEEEDGEVGGHWSSLSNQTISWQRHLLGKRPQVTSLFGADVLWAKGYTGAKVKMAIFDTGIRADHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVVAGQDSECLGFAPDTELYAFRVFTDAQVLDIMPQRMMGRFLFLKKGILCFILLISCWLLPWFTETEVF*

Click here to download the sequence:
Link to NCBI Protein BLAST