Transcript Information: S_Transcript_53647.p1


Annotated TAIR IDAT2G47700.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)RFI2
Annotation TypeOrtholog
Chromosome Positionchr2:19552506-19554351 | Reverse length=358
E-Value1.8E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1789010204002
Replicate 28.2051696701501
Replicate 37.6209653238019
Condition 2: 8 Hour
Replicate 110.045845025426
Replicate 210.723696042183
Replicate 39.6890216386279
Condition 3: 24 Hour
Replicate 17.4019853149947
Replicate 24.6826056975924
Replicate 38.9632058629751


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53647.p1 GENE.S_Transcript_53647~~S_Transcript_53647.p1 ORF type:5prime_partial len:121 (+),score=25.42,zf-RING_2|PF13639.2|7.1e-09,zf-RING_11|PF17123.1|1e-07,zf-C3HC4|PF00097.21|1.9e-06 S_Transcript_53647:2-364(+)
TTGATTGTGATTATAGTTATGGGGAGGCCAGAAGAAAGTGATCAAGCAAATGATATGAACGGTACTGAGTCAGACTCTGGGGTTCCTTGTTCTATATGTCTTGATTTGGTGAGCTATGGTGGTGAACGATCCAGGGCTAAATTACAATGTGGTCATGAATTCCATTTGGATTGCATTGGTTCTGCATTTAATGTGAAGGGAATGATGCAATGCCCTAATTGCCGGAAAATAGAGAAAGGTCGCTGGATGTTCGCAAGTGGTCCATCACATTCATCTCCTGAGTTGAGCATGGATGAGGGGGCAATTGACAATTATCCCCTTTACTTCAGTGTTGCTGAAATGGTAACGCAAGATGCTTCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53647.p1 GENE.S_Transcript_53647~~S_Transcript_53647.p1 ORF type:5prime_partial len:121 (+),score=25.42,zf-RING_2|PF13639.2|7.1e-09,zf-RING_11|PF17123.1|1e-07,zf-C3HC4|PF00097.21|1.9e-06 S_Transcript_53647:2-364(+)
LIVIIVMGRPEESDQANDMNGTESDSGVPCSICLDLVSYGGERSRAKLQCGHEFHLDCIGSAFNVKGMMQCPNCRKIEKGRWMFASGPSHSSPELSMDEGAIDNYPLYFSVAEMVTQDAS*

Click here to download the sequence:
Link to NCBI Protein BLAST