Transcript Information: S_Transcript_53658.p1


Annotated TAIR IDAT2G47700.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)RFI2
Annotation TypeOrtholog
Chromosome Positionchr2:19552506-19554351 | Reverse length=358
E-Value4.4E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.117339312548
Replicate 27.2934841512446
Replicate 35.7919336460894
Condition 2: 8 Hour
Replicate 120.796661631584
Replicate 217.749565862924
Replicate 316.911746860151
Condition 3: 24 Hour
Replicate 19.7489562685296
Replicate 211.800166357933
Replicate 38.754759214999


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53658.p1 GENE.S_Transcript_53658~~S_Transcript_53658.p1 ORF type:5prime_partial len:121 (+),score=29.57,zf-RING_2|PF13639.2|7.1e-09,zf-RING_11|PF17123.1|1e-07,zf-C3HC4|PF00097.21|1.9e-06 S_Transcript_53658:2-364(+)
TTGATTGTGATTATAGTTATGGGGAGGCCAGAAGAAAGTGATCAAGCAAATGATATGAACGGTACTGAGTCAGACTCTGGGGTTCCTTGTTCTATATGTCTTGATTTGGTGAGCTATGGTGGTGAACGATCCAGGGCTAAATTACAATGTGGTCATGAATTCCATTTGGATTGCATTGGTTCTGCATTTAATGTGAAGGGAATGATGCAATGCCCTAATTGCCGGAAAATAGAGAAAGGTCACTGGTTGTATGGAAGTGGTCCTACAAGTTCATCTCCTGAGTTGAGCATGGATGAGGGGGCAATTGACAATTATCCCCTTTACTTCAGTGTTGCTGAAATGGTAACGCAAGATGCTTCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53658.p1 GENE.S_Transcript_53658~~S_Transcript_53658.p1 ORF type:5prime_partial len:121 (+),score=29.57,zf-RING_2|PF13639.2|7.1e-09,zf-RING_11|PF17123.1|1e-07,zf-C3HC4|PF00097.21|1.9e-06 S_Transcript_53658:2-364(+)
LIVIIVMGRPEESDQANDMNGTESDSGVPCSICLDLVSYGGERSRAKLQCGHEFHLDCIGSAFNVKGMMQCPNCRKIEKGHWLYGSGPTSSSPELSMDEGAIDNYPLYFSVAEMVTQDAS*

Click here to download the sequence:
Link to NCBI Protein BLAST