Transcript Information: S_Transcript_53685.p1


Annotated TAIR IDAT1G21450.1
Annotated Gene NameSCARECROW-like 1
Annotated Gene Symbol(s)SCL1
Annotation TypeOrtholog
Chromosome Positionchr1:7509721-7511502 | Forward length=593
E-Value8.4E-224
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.572486008271
Replicate 234.855159282606
Replicate 335.430357210146
Condition 2: 8 Hour
Replicate 138.816123292837
Replicate 238.381061427788
Replicate 336.725836515739
Condition 3: 24 Hour
Replicate 139.441037348155
Replicate 231.604581280778
Replicate 329.294594694383


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53685.p1 GENE.S_Transcript_53685~~S_Transcript_53685.p1 ORF type:complete len:545 (+),score=98.46,GRAS|PF03514.10|6.3e-125 S_Transcript_53685:542-2176(+)
ATGTCTTTAGTTAGTTCAGCCGATATGTCTACAACATCGTATGCAAATTCCAAGCTCTTTTCGCTGCAAGGAGGTAATAACAGCTCTGGGTTGTCCACTCAACTGTATGGCTCTGACAAGCACAAGATCATGTACATGACGGAATCTTTCAATGGTCCAAGTTATGATCCAAAGTTCTTCATGGACTCACCCTCCGAAGAGCTCATCCATCCATTGGGACATGACGAGAGTTCTTACCCAACAAATTACGAGCTGGATTACTTTGTAAATCAGAGTTCTGATGCAATTGAATATGACGAGGTTAAGATGAGGCTGAAGCTTCAAGAATTGGAGCATGCCCTCCTTGATGAAGACGAGGTTGTGATCGGGCCTGGGCACAGCATGGAACTTGATGAAGATTGGGCCAACCCGTCAAGGATGCTCCATGACTCACCCAAAGAGTCGAGTTCCTCGGAATCTTCTAACTTCAGTAGCATCAGTAGCAGCAAAGAGTTGTCGGTCCCTTCTCCTCGTACTCCCAAACAGCTGCTCTTCAATTGTGCAACTATGATTGCAGAGGGAAATCTCGACGAAGCTGCTACTATGATCGTTGAGCTTAGACAAATGGTTTCAATACAAGGGGACCCATCCCAGAGGATAGCGGCCTACATGGTAGAAGGCCTTGCTGCCCGCTTGGCTGCATCGGGTAAAGTTCTATACAAAGCCTTGAAATGCAAAGAGCCACCTTCACTTGACAGGCTTGCAGCAATGCAAATCCTTTTCGAGGTATGCCCATGTTTTAAATTTGGGTATATGGCAGCGAATGCAAAGATCATAGAGGCAATTAAGAATGAGAAGAAGGTACACATTATAGATTTCGACATAAACCAAGGAAATCAATATATAATGCTTATACAATCCCTTGCAGAACAAAGTAATAAGCCCGTACAGTTGAGGGTGACGGGGGTTGATGATCCTGAATCAATTCAGCGCCCTATTGGTGGCCTTAAAAACATTGGGCAAAGGCTGGAAGCGTTAGGTGAATTAGTTGGAGTGGCATTCGAGTTCAAAGCAGTACCAGCAAGAACTCCACTTGTCACCCCGGCAATGTTAGAATGCCGAGCTGGAGAAGCCCTGGTGGTTAACTTTGCCTTCCAGCTTCATCACATGCCTGATGAGAGTGTCTCGACCATCAACCAACGTGACCAACTTCTTCGAATGGTTAAAAGCCTAAACCCTAAGTTAGTGACCATTGTTGAGCAGGATGTAAACACAAATACCACCCCTTTCCTTTCTAGGTTTTCAGAGGTGTACAGTTATTACTCTGCTATTTACGAGTCACTTGATGCTACCCTCCCTAGAGAGAGCCAGGACCGAGTGAACGTTGAGAAGCAGTGTTTGGCGCGTGACATTGTGAACATTGTTGCTTGTGAAGGGGAGGACAGGATTGAGCGTTATGAGGTTGCTGGGAAATGGAGGGCAAGAATGCTGATGGCTGGTTTCAGCTCTCGACCAATGAGTAAGAACATCAGGGATATGATTCAGCAAGTAATTGTATCGCAGTATTGTAACAGGTTTGCATTGAAGGAGGAAATGGATGAGCTTCATTTTGGATGGGAAGAAAAAAACTTGGTTGTCACATCAGCCTGGACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53685.p1 GENE.S_Transcript_53685~~S_Transcript_53685.p1 ORF type:complete len:545 (+),score=98.46,GRAS|PF03514.10|6.3e-125 S_Transcript_53685:542-2176(+)
MSLVSSADMSTTSYANSKLFSLQGGNNSSGLSTQLYGSDKHKIMYMTESFNGPSYDPKFFMDSPSEELIHPLGHDESSYPTNYELDYFVNQSSDAIEYDEVKMRLKLQELEHALLDEDEVVIGPGHSMELDEDWANPSRMLHDSPKESSSSESSNFSSISSSKELSVPSPRTPKQLLFNCATMIAEGNLDEAATMIVELRQMVSIQGDPSQRIAAYMVEGLAARLAASGKVLYKALKCKEPPSLDRLAAMQILFEVCPCFKFGYMAANAKIIEAIKNEKKVHIIDFDINQGNQYIMLIQSLAEQSNKPVQLRVTGVDDPESIQRPIGGLKNIGQRLEALGELVGVAFEFKAVPARTPLVTPAMLECRAGEALVVNFAFQLHHMPDESVSTINQRDQLLRMVKSLNPKLVTIVEQDVNTNTTPFLSRFSEVYSYYSAIYESLDATLPRESQDRVNVEKQCLARDIVNIVACEGEDRIERYEVAGKWRARMLMAGFSSRPMSKNIRDMIQQVIVSQYCNRFALKEEMDELHFGWEEKNLVVTSAWT*

Click here to download the sequence:
Link to NCBI Protein BLAST