Transcript Information: S_Transcript_53702.p1


Annotated TAIR IDAT1G62045.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT1G11740.1); Has 26 Blast hits to 26 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:22934905-22935108 | Reverse length=67
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7027859789672
Replicate 23.5458054646006
Replicate 32.9640111562929
Condition 2: 8 Hour
Replicate 15.5217528499719
Replicate 26.5917054027766
Replicate 36.8515224444583
Condition 3: 24 Hour
Replicate 110.922441745297
Replicate 28.7012848016334
Replicate 37.8818888765988


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53702.p1 GENE.S_Transcript_53702~~S_Transcript_53702.p1 ORF type:5prime_partial len:112 (+),score=32.16 S_Transcript_53702:1-336(+)
CTAGCCTTCATGGAATCATGTTATATTAGAGCAAACTTCTATCCAAGCGAGCATCAAATCTCAAGGCTCCTTGCTCACAAGGTTGACATATACATATATAGTGGGATGGCTATGGAGGCACCTTCATGGGCTGATCAATGGGGAGAAGGAGGCATAGGGGCAATGGATGAAGTGAAACCAAAGGAAGAGAAAGGGAGCAACAAGAAGAAGACAGCAGTTTTTGCAGGACTTGGAAAAGCTGCATATGCAGGAGCACAGAAAGTGAAGAATGGAACATCTATGGGGATTAAATGGGTTAAACAGCAATGCCAGCAGAAAAAAGATCCTCCTAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53702.p1 GENE.S_Transcript_53702~~S_Transcript_53702.p1 ORF type:5prime_partial len:112 (+),score=32.16 S_Transcript_53702:1-336(+)
LAFMESCYIRANFYPSEHQISRLLAHKVDIYIYSGMAMEAPSWADQWGEGGIGAMDEVKPKEEKGSNKKKTAVFAGLGKAAYAGAQKVKNGTSMGIKWVKQQCQQKKDPPK*

Click here to download the sequence:
Link to NCBI Protein BLAST