Transcript Information: S_Transcript_53713.p1


Annotated TAIR IDAT3G24460.1
Annotated Gene NameSerinc-domain containing serine and sphingolipid biosynthesis protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8886160-8889717 | Reverse length=409
E-Value4.6E-218
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.535905565955
Replicate 222.362555719981
Replicate 314.83437467594
Condition 2: 8 Hour
Replicate 13.9985106844624
Replicate 24.9242384234181
Replicate 36.6612023765567
Condition 3: 24 Hour
Replicate 120.717022658199
Replicate 222.417465798344
Replicate 334.269082072169


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53713.p1 GENE.S_Transcript_53713~~S_Transcript_53713.p1 ORF type:3prime_partial len:368 (+),score=35.60,Serinc|PF03348.11|2.7e-46,Serinc|PF03348.11|1.1e-08 S_Transcript_53713:524-1624(+)
ATGGAGAGTGCCGCAAACAGCAGCACCAAGGAAAAGTATCCTGGACTCAGAACTGGCTCTTGGTTTAGCCAATTTTGTTATGGCTGCAACCCATGGATGGCTAGATATGTTTACGGACTCATGTTTCTCGTCACAAATTTTTTAGCTTGGGCTATTCGTGATTATGGCCAAAGCGCGATGAAAGAGGTGGAAAGATTGGAAGGATGCACTGGTGGTCTGGAATGCTTAGGCACTGCAGGAGTACTCCGCGTGAGCTTGGGATGTTTTATGTTCTTCTTCACAATGTTCCTTTCTACAGTTGGCACCTCAAAGGTGTATAATTGTAGAGACTCGTGGCATTCAGGGTGGTGGTCTGCTAAAGCTATCATGTTTGTTGGGTTCTTGCTTCTTCCATTCTTGTTACCTTCCTCGATCATCTATCTATATGGTGAGGTGGCACATTTTGGCGCTGGGATCTTTCTCTTAATCCAGCTTGTAAGTGTGATTAGTTTCATTACCTGGCTGAATGATTGCTGCCTGTCAGAGAAATTTGCAGAGAAATGCCGCGTCCATGTGATGTTAATTGCAACGGCAGCATATGTTGTGTGCATAGTGGGGATTATTTTGATGTACATCTGGTATGCACCAGAATCATCTTGTCTCTTGAATATTTTTTACATCACTTGGACATTGGTGCTTCTTCAGCTGATGACCAGTGTCTCCCTACACCCAAAAATCAATGCTGGTTTCTTGGCTCCTGGGCTGATGGGACTTTACCTTGTGTTCATCTGCTGGTGTGCCATCAGAAGTGAACCAGCGGGAACTAGCTGCAACAGAAAGGCGGAAGCATCAAATAGAACTGACTGGCTGACCATCATAAGCTTCATTGTAGCATTGCTCACGATAGTCATTGCAACATTTTCAACAGGAATTGATTCTCAATGCTTTCAGTTCTGGAAAAGGGAGACACAGGCAGAAGATGATGTGCCATATGGTTACGGATTCTTCCATTTTGTTTTCGCTACTGGATCAATGTACTTTGCAATGTTGCTGATTGGTTGGAATACTCATCATGCAATGAAGAAGTGGACAATTGATGTGGGTTGGACAAGCACCTGGGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53713.p1 GENE.S_Transcript_53713~~S_Transcript_53713.p1 ORF type:3prime_partial len:368 (+),score=35.60,Serinc|PF03348.11|2.7e-46,Serinc|PF03348.11|1.1e-08 S_Transcript_53713:524-1624(+)
MESAANSSTKEKYPGLRTGSWFSQFCYGCNPWMARYVYGLMFLVTNFLAWAIRDYGQSAMKEVERLEGCTGGLECLGTAGVLRVSLGCFMFFFTMFLSTVGTSKVYNCRDSWHSGWWSAKAIMFVGFLLLPFLLPSSIIYLYGEVAHFGAGIFLLIQLVSVISFITWLNDCCLSEKFAEKCRVHVMLIATAAYVVCIVGIILMYIWYAPESSCLLNIFYITWTLVLLQLMTSVSLHPKINAGFLAPGLMGLYLVFICWCAIRSEPAGTSCNRKAEASNRTDWLTIISFIVALLTIVIATFSTGIDSQCFQFWKRETQAEDDVPYGYGFFHFVFATGSMYFAMLLIGWNTHHAMKKWTIDVGWTSTWV

Click here to download the sequence:
Link to NCBI Protein BLAST