Transcript Information: S_Transcript_53777.p1


Annotated TAIR IDAT4G12420.1
Annotated Gene NameCupredoxin superfamily protein
Annotated Gene Symbol(s)SKU5
Annotation TypeOrtholog
Chromosome Positionchr4:7349941-7352868 | Reverse length=587
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.048501441044
Replicate 228.265627699106
Replicate 326.825797939783
Condition 2: 8 Hour
Replicate 114.46823619159
Replicate 215.554837522234
Replicate 320.777568625058
Condition 3: 24 Hour
Replicate 110.076596088254
Replicate 213.926416204321
Replicate 318.767918564076


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53777.p1 GENE.S_Transcript_53777~~S_Transcript_53777.p1 ORF type:complete len:594 (+),score=95.66,Cu-oxidase|PF00394.18|2.4e-43,Cu-oxidase|PF00394.18|79,Cu-oxidase_3|PF07732.11|1.7e-40,Cu-oxidase_3|PF07732.11|15,Cu-oxidase_3|PF07732.11|1.1e+04,Cu-oxidase_2|PF07731.10|4.1e+03,Cu-oxidase_2|PF07731.10|1.2e-25 S_Transcript_53777:254-2035(+)
ATGCCTTCCACTAGCATTATAGTGTTGTTTATTCTCAACATTTCACTGTTAGTGAGCTTATCCTTAGCTGGAGACGCCTTTGTTTACTATGATTTTGAGGTCTCTTACATCAATGCTTCTCCTTTGGGAGTTCAACAGCAGGTCATTGCTGTAAATGGGAAATTTCCCGGACCTCCCATTAATGTGACCACTAATGAACATGTGGTTGTCAATGTGAGGAACAAATTGGATGAAGATCTCTTAATCACTTGGGCTGGGGTATTTCAGAGAAAGAGCAGTTGGCAAGATGGTGTATTGGGGACTAATTGCCCAATACCACCAAAGTGGAACTGGACTTACAATTTCCAAGTAAAGGATCAGATTGGAAGTTTCTTTTACTTCCCTTCATTGAACTTCCAGAGAGCTGCTGGAGGTTCTGGTGGCATTATCATTAACAACCGCCCCGTCATTCCAGTTCCTTTTGCTCCCCCTGAGGCTGATATTATAATCCTTATTGGGGATTGGTACACCAGGAGTCATGTGGATTTGAGGAAAGCTTTGGATCAAGGGAAGTCATTAGGAAAGCCAGATGGTGTACTTATAAATGGGAAAGGACCTTACAGATATAATGACACCCTTGTTCCTGACGGCATTGATTATGAGACTATTAATGTTGATCCTGGGAAAACATATCGCCTCCGTGTACACAATGTCGGAGTCTCAACTAGCTTGAACTTCAGAATTCAAAACCATAATCTGCTTTTAGCAGAAACTGAGGGATCCTACACTGTGCAACAAAACTACACTAGTTTGGACATTCATGTCGGGCAATCTTATTCATTCTTGGTGACTATGGACCAAAATGCAAGCTCTGATTACTACATAGTGGCAAGTGCTCGGTTTGTCAATGAAACAACTTGGCAGCGGGTAACTGGAGTTGGAATCTTGCGTTACTCAAATTCCAAAGGAAAGGCAAAAGGCCCCCTCCCAGAAGCCCCACAAGATGAATTTGACAAGACTTTCTCCATGAACCAGGCTAGATCAATCAGGTGGAACGTGAGTGCTAGTGGTGCCCGTCCCAACCCGCAGGGCTCCTTCAAATATGGTTCCATAAATGTGACCAGTCGTTATGTTTTACAACACAAGGCACCAGAGAAAGTAAATGGAAAAAAAAGGGCTACACTCAATGGTGTTTCATTTGTGAATCCTACCACACCAATTAGGCTTGCTGATAAGCACAAAGTGAAAGGCATTTATAAGCTCGACTTTCCCCATAAGCCATTGACAGGACCGTCAAAAATGAGCACGTCGGTGATCAATGGATCATTCAGGGGTTTTGTGGAACTCATCCTTCAAAACAATGACACGAAGGTGCACACATTCCACCTCGATGGGTACAACTTTTTTGTGGTTGGGATGGACTATGGTGAGTGGACAGAAAACAGCATTGGAACATACAACAAATGGGATGGGATTGCCCGTACTTCAGCCCAGGTTTACCCGGGGGCATGGACTGCTATTCTAGTTTCCCTCGATAATGTTGGTGTTTGGAATCTGAGAACAGAAAATCTGGATGCATGGTATCTTGGACAAGAAACCTATATCAGAGTAATCAATAAAGAAGTAGAAAACAATCCAGAGCTCCAGAGCAAGTTTGAGTTTAACATTCCAGATAATGTACTTTACTGTGGCGCGCTTCGCAAGCTGCAAAAGCCTCAGCGTATCTCTTCTGCAACGAGCAATTCCATTCAGCAAATGTTTACATTGTTGATGATTTGTGTTGCAGTTTTCCTTATCCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53777.p1 GENE.S_Transcript_53777~~S_Transcript_53777.p1 ORF type:complete len:594 (+),score=95.66,Cu-oxidase|PF00394.18|2.4e-43,Cu-oxidase|PF00394.18|79,Cu-oxidase_3|PF07732.11|1.7e-40,Cu-oxidase_3|PF07732.11|15,Cu-oxidase_3|PF07732.11|1.1e+04,Cu-oxidase_2|PF07731.10|4.1e+03,Cu-oxidase_2|PF07731.10|1.2e-25 S_Transcript_53777:254-2035(+)
MPSTSIIVLFILNISLLVSLSLAGDAFVYYDFEVSYINASPLGVQQQVIAVNGKFPGPPINVTTNEHVVVNVRNKLDEDLLITWAGVFQRKSSWQDGVLGTNCPIPPKWNWTYNFQVKDQIGSFFYFPSLNFQRAAGGSGGIIINNRPVIPVPFAPPEADIIILIGDWYTRSHVDLRKALDQGKSLGKPDGVLINGKGPYRYNDTLVPDGIDYETINVDPGKTYRLRVHNVGVSTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARFVNETTWQRVTGVGILRYSNSKGKAKGPLPEAPQDEFDKTFSMNQARSIRWNVSASGARPNPQGSFKYGSINVTSRYVLQHKAPEKVNGKKRATLNGVSFVNPTTPIRLADKHKVKGIYKLDFPHKPLTGPSKMSTSVINGSFRGFVELILQNNDTKVHTFHLDGYNFFVVGMDYGEWTENSIGTYNKWDGIARTSAQVYPGAWTAILVSLDNVGVWNLRTENLDAWYLGQETYIRVINKEVENNPELQSKFEFNIPDNVLYCGALRKLQKPQRISSATSNSIQQMFTLLMICVAVFLIH*

Click here to download the sequence:
Link to NCBI Protein BLAST