Transcript Information: S_Transcript_53782.p1


Annotated TAIR IDAT1G20780.1
Annotated Gene Namesenescence-associated E3 ubiquitin ligase 1
Annotated Gene Symbol(s)PUB44, ATPUB44, SAUL1
Annotation TypeOrtholog
Chromosome Positionchr1:7217812-7220609 | Forward length=801
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.241112408167
Replicate 214.771769421186
Replicate 313.594154361376
Condition 2: 8 Hour
Replicate 115.430779971488
Replicate 215.226049319912
Replicate 314.219293918311
Condition 3: 24 Hour
Replicate 113.257214305103
Replicate 212.501291643464
Replicate 311.929345326744


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53782.p1 GENE.S_Transcript_53782~~S_Transcript_53782.p1 ORF type:complete len:814 (+),score=159.26,U-box|PF04564.11|1.7e-14,HEAT_2|PF13646.2|0.047,HEAT_2|PF13646.2|28,HEAT_2|PF13646.2|35,HEAT_2|PF13646.2|2.6,HEAT_2|PF13646.2|3.3e+02,HEAT_2|PF13646.2|1.8e-06,Arm|PF00514.19|36,Arm|PF00514.19|6.3e+03,Arm|PF00514.19|4.9e+02,Arm|PF00514.19|4.2e+02,Arm|PF00514.19|8.7,Arm|PF00514.19|1.9e+03,Arm|PF00514.19|2.4e+02,Arm|PF00514.19|0.47,Arm|PF00514.19|0.0013,Arm|PF00514.19|9.9e+03,HEAT|PF02985.18|0.61,HEAT|PF02985.18|3.5e+03,HEAT|PF02985.18|3.1e+02,HEAT|PF02985.18|2e+02,HEAT|PF02985.18|9.9e+03,HEAT|PF02985.18|1.9e+03,HEAT|PF02985.18|1,HEAT|PF02985.18|1.1e+04 S_Transcript_53782:561-3002(+)
ATGGCTGGGAGTTCGGGGGGCACTTCAGAACATGATAGTCAGTCAGATGAGAGCTACCAGTATGAGAGATTTCATATAGAACCCATCTTTAGCCCATTTGTTTGCCCTTTAACAAAACAGGTCATGCGTGATCCTGTTACCATAGAAAATGGGAACACATTTGAGCGAGAAGCAATAGATAATTGGTTCAAGGAATGTGAGGACAGTGGAAGGAAGCCCACATGTCCAGTAACTTCACAAGTATTGCACAGCACAGATTTGAACCCTAGTATAGCTCTAAGGAATACTATCGAAGAATGGACTGCCAGGAACGAAGCTGCAAAACTTGATATGGCACGTAGAACTTTGTCTTCCGGTACTTCAGAAAGGGATATTCTTCAGGCCTTGAAATATGTGGAATACCTCTCAAAAGGAAGTAGATCAAATAAGCATGCTGTTCATAATGCAGAGATCGTACATCTGATTGTAGACATGCTTAGGAATAGCAGCAGAAAAGTTCGATCTAAAGCACTGGAAACCCTTCGAATCATAGCAGAGCAGGACTCAGATATGAAGGAAGTAATGGGTGAAGGGGGCACTGTGCGTACTATAGTCAAATTTTTATCTCCTGAGCAATCTACAGAGAGGGAAGAAGCTATCTCGTTGCTCTATGAGCTTTCTAAATCTTCAAATCTTTGTGACAAGATTGGTTCGATCCAAGGAGCCATTCTTATATTAGTTGGGATTGCAAGCAGCCAGTCAGAAAAGCCTGGGACTGTTGAGAAAGCGGACAAGACACTCAATAATCTGGCACAGTCTGAAAATAATGTACGACAGATGGCTGAGAGCGGTAGATTGGAACCTCTTCTGACACTACTCCTTGAAGGGCCACCTGAGAAAAAGTTATCCATGGCTGCATTCCTGGGTGACCTAGCTCTGAACAATGACGTGAAGGTTAATGTGGCTCGCACTGTGGGCTCATCACTTGTGAATCTCATGAAAAAAGGTGACATAAATTCAAGAGAAGTGTCCTTAAAAGCGCTGAACCAGATTTCATCCTGTGATGCAAGCGCAGAGGTTTTGATAGAAGCCGGAATTCTTCCCCCCTTAGTGAAGGGCCTTTTCACGGTTGGAGTGAAACAGCTTCCCATGCGACTGAAGGAGGTCTCTGCAACTATTCTCTCAAGTGTCGTGAATTCAGGATATGACATTGGTTCTGTTATAATTGGACCTGAAAGGCAGACCCTGGTTTCCGAAAAAACCGTGCACAGCCTCCTCCATCTTATCAGTAACACTGGTCCATCAATCGAGTGCAAACTCCTTCAGGTTCTTGTTGGACTTACCAGTTATGAAACCACTGTTCTGAATGTTGTTGCTGCCATTAAAAGTTCTGGTGCGACCATCAGTTTGGTTCAGTTCATTGAAGCTCCACAACGGGACTTGCGTTTAGCTGCAGTGAAACTTCTGCACAACCTTTCTCCTCACATGGCCCAAGAATTAGCAGATGCCTTATGTGGCTCAACTGGCCAGCTAGGCAGTCTAGTGCAAATTATATCAGAAAATCCTGGAATCTCGGAAGAGCAGGCTGCTGCAGTTGGCCTTTTAGCAGAACTCCCGGAAGGAGATTTGGCGCTAACACGGAAAATGCTCAGGGAAGGTGTTTTTGGCCTTATCATATCTGGAGTCAAGAGAATCAGGCAAGGGGAGACTAGGGGGAGCCGTTTTATGACTCCATATCTGGAAGGGCTGGTCCGTTCTCTTGCAAGGGTTACGTATGTGTTGGCTGAGGAGCCTGAGATACGTGCTTTGTGTTGCGAGCAAGATCTTGCATCATTGTTCATTGGATTGCTCCAGACAAATGGTATCGACAATGTGCAAATAGCTTCAGCTCGAGCTTTGCGGAACCTATCCTCAGAAACCATAAAATTGACAAGAAAGCCAGAGTTGCCACCACCTGGTATGTGTGCATCAATATTCGCTTGTTTTAGTAAACCTCCCAACATGTCTGGGTTATGCCCTGTTCATGGGGGTCTGTGTTCTTTGAAAGAGACATTTTGTCTGGTTGAGGGGCAGGCTGTTGAAAAGTTGGTAGCCCTTTTAGATCACACAAACAATAAAGTTGTTGAAGCAGCACTTGCTGCATTATCCACATTGTTAGATGATGGGGTAAACATTGAAGAAGGGGTTCTGGTATTGCATGACGCTGATGGAACCAAGCCCATTTTCGAGGTTCTGGTGGAGAACCGAACAGAGGACCTACGAAAAAGGGCAGTCTGGGTGGTTGAGAGGCTCTTGCGGACTGATCAAATAGCTTATGACATATCAAATGATCAGAATGTTGGGACAGCGCTCGTTGATGCTTTCCAGCATGGTGACTATCGCACTCGGCAAATTGCTGAGCGAGCTTTGAAGCATGTTGATAGAATCCCAAACTTCTCAGGGATATTCCCCAACAATGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53782.p1 GENE.S_Transcript_53782~~S_Transcript_53782.p1 ORF type:complete len:814 (+),score=159.26,U-box|PF04564.11|1.7e-14,HEAT_2|PF13646.2|0.047,HEAT_2|PF13646.2|28,HEAT_2|PF13646.2|35,HEAT_2|PF13646.2|2.6,HEAT_2|PF13646.2|3.3e+02,HEAT_2|PF13646.2|1.8e-06,Arm|PF00514.19|36,Arm|PF00514.19|6.3e+03,Arm|PF00514.19|4.9e+02,Arm|PF00514.19|4.2e+02,Arm|PF00514.19|8.7,Arm|PF00514.19|1.9e+03,Arm|PF00514.19|2.4e+02,Arm|PF00514.19|0.47,Arm|PF00514.19|0.0013,Arm|PF00514.19|9.9e+03,HEAT|PF02985.18|0.61,HEAT|PF02985.18|3.5e+03,HEAT|PF02985.18|3.1e+02,HEAT|PF02985.18|2e+02,HEAT|PF02985.18|9.9e+03,HEAT|PF02985.18|1.9e+03,HEAT|PF02985.18|1,HEAT|PF02985.18|1.1e+04 S_Transcript_53782:561-3002(+)
MAGSSGGTSEHDSQSDESYQYERFHIEPIFSPFVCPLTKQVMRDPVTIENGNTFEREAIDNWFKECEDSGRKPTCPVTSQVLHSTDLNPSIALRNTIEEWTARNEAAKLDMARRTLSSGTSERDILQALKYVEYLSKGSRSNKHAVHNAEIVHLIVDMLRNSSRKVRSKALETLRIIAEQDSDMKEVMGEGGTVRTIVKFLSPEQSTEREEAISLLYELSKSSNLCDKIGSIQGAILILVGIASSQSEKPGTVEKADKTLNNLAQSENNVRQMAESGRLEPLLTLLLEGPPEKKLSMAAFLGDLALNNDVKVNVARTVGSSLVNLMKKGDINSREVSLKALNQISSCDASAEVLIEAGILPPLVKGLFTVGVKQLPMRLKEVSATILSSVVNSGYDIGSVIIGPERQTLVSEKTVHSLLHLISNTGPSIECKLLQVLVGLTSYETTVLNVVAAIKSSGATISLVQFIEAPQRDLRLAAVKLLHNLSPHMAQELADALCGSTGQLGSLVQIISENPGISEEQAAAVGLLAELPEGDLALTRKMLREGVFGLIISGVKRIRQGETRGSRFMTPYLEGLVRSLARVTYVLAEEPEIRALCCEQDLASLFIGLLQTNGIDNVQIASARALRNLSSETIKLTRKPELPPPGMCASIFACFSKPPNMSGLCPVHGGLCSLKETFCLVEGQAVEKLVALLDHTNNKVVEAALAALSTLLDDGVNIEEGVLVLHDADGTKPIFEVLVENRTEDLRKRAVWVVERLLRTDQIAYDISNDQNVGTALVDAFQHGDYRTRQIAERALKHVDRIPNFSGIFPNNG*

Click here to download the sequence:
Link to NCBI Protein BLAST