Transcript Information: S_Transcript_53800.p1


Annotated TAIR IDAT1G80940.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30410959-30411943 | Forward length=213
E-Value2.6E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 174.02127785413
Replicate 275.218719747248
Replicate 364.764026712179
Condition 2: 8 Hour
Replicate 152.767942552162
Replicate 260.664129102142
Replicate 349.373451661771
Condition 3: 24 Hour
Replicate 176.507894271709
Replicate 274.843284740496
Replicate 366.750433797726


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53800.p1 GENE.S_Transcript_53800~~S_Transcript_53800.p1 ORF type:complete len:215 (+),score=59.52 S_Transcript_53800:423-1067(+)
ATGATAATGGGAGAAGCAAATTCTGAGAGGAACAACAAGAGTAGTGAAACAAACACTTTGGATGGCTTTTCTTCTGTCTCTTCCTCTTCTTCTACTCCCAGGGTCTTTTGGCAATCTCGCAAGCGTCGAGCTAAGCCGAGAGACGAGCCGATGTTAGAAACGCCTACAAAGCAGGAAGACAGTACTCCAGATGAAACAAAGGTACAAGACTCAACTCCTCCACCTACTGTTCTTTCTGAGCGAAGAAAGGCTCTATTTGAACCACTGGAACCTATTGATAACCTCCCAAGAAAACGACCCTCAAATGAAAGCTTACTCCCTCCACCAGACTTTGATTCAACAGCATATCCAAAGGGCTGGGTCATAGGCAAGAAACGGAAACTCGTGAATGTGGATGTTGTTGAGAGCATGCGAAGGATTGCTGTCCAGGAAATGAATCGAAAGGACCGTGAAATTGATGGACTAAGTGAGCAATTGGATGAGGATGCTCGGGTATTGGAACATCTGCAAATCCAGCTTCTGGAAGAAAAGAGAAAGCGTTCAGATGTGGAGAGAGAAAACACAATGCTGCAGGATCAAATAAACATGTTGATGAGCATGATACAAGAAAATGAAGATGCAGGGGAGGATGCAGAAGAACCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53800.p1 GENE.S_Transcript_53800~~S_Transcript_53800.p1 ORF type:complete len:215 (+),score=59.52 S_Transcript_53800:423-1067(+)
MIMGEANSERNNKSSETNTLDGFSSVSSSSSTPRVFWQSRKRRAKPRDEPMLETPTKQEDSTPDETKVQDSTPPPTVLSERRKALFEPLEPIDNLPRKRPSNESLLPPPDFDSTAYPKGWVIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLSEQLDEDARVLEHLQIQLLEEKRKRSDVERENTMLQDQINMLMSMIQENEDAGEDAEEP*

Click here to download the sequence:
Link to NCBI Protein BLAST