Transcript Information: S_Transcript_53801.p3


Annotated TAIR IDAT1G80940.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30410959-30411943 | Forward length=213
E-Value7.1E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1412759614513
Replicate 21.0143811290811
Replicate 31.2719128333518
Condition 2: 8 Hour
Replicate 10
Replicate 20.2571476855141
Replicate 30.73502922775798
Condition 3: 24 Hour
Replicate 10.50218122966883
Replicate 20.78151074401198
Replicate 30.86972566914193


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53801.p3 GENE.S_Transcript_53801~~S_Transcript_53801.p3 ORF type:5prime_partial len:87 (-),score=9.90 S_Transcript_53801:595-855(-)
CTGCATCTTCATTTTCTTGTATCATGCTCATCAACATGTTTATTTGATCCTGCAGCATTGTGTTTTCTCTCTCCACATCTGAACGCTTTCTCTTTTCTTCCAGAAGCTGGATTTGCAGATGTTCCAATACCCGAGCATCCTCATCCAATTGCTCACTTAGTCCATCAATTTCACGGTCCTTTCGATTCATTTCCTGGACAGCAATCCTTCGCATGCTCTCAACAACATCCACATTCACGAGTTTCCGTTTCTTGCCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53801.p3 GENE.S_Transcript_53801~~S_Transcript_53801.p3 ORF type:5prime_partial len:87 (-),score=9.90 S_Transcript_53801:595-855(-)
LHLHFLVSCSSTCLFDPAALCFLSPHLNAFSFLPEAGFADVPIPEHPHPIAHLVHQFHGPFDSFPGQQSFACSQQHPHSRVSVSCL*

Click here to download the sequence:
Link to NCBI Protein BLAST