Transcript Information: S_Transcript_53810.p1


Annotated TAIR IDAT1G34770.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: MAGE protein (InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104; Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:12746624-12748449 | Forward length=237
E-Value5.4E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.7742184962278
Replicate 24.2119870973437
Replicate 32.5149185568546
Condition 2: 8 Hour
Replicate 16.0098827257375
Replicate 23.8642284014073
Replicate 35.6196325504042
Condition 3: 24 Hour
Replicate 16.7520548970927
Replicate 25.5629355687398
Replicate 33.210078378833


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53810.p1 GENE.S_Transcript_53810~~S_Transcript_53810.p1 ORF type:complete len:110 (+),score=6.00 S_Transcript_53810:851-1180(+)
ATGTCAAGCTCTTACTGGAGGCACTTGTGCAGCAGAGGCCAGTATTTGGTGTATCTTAAAGAGGAAAAAAATAGTAGAAATTGTTTATTCCCTCCAGCAGAAGAGCACCTTTTTTCATGTTATATGCTGATCTTTAGCTTCATAATGTACTTACTATTACTGATTCTTTGGTACAGATATCTCCAGAAGGATAAGGTTAATGGCCCGGAAGGACATACTGTTATGTATGAGCTTGCTGAGAGAGCATTAGATGATGAACTTAGTCAAAAAGTTAAAGACAACATAGCACAGGTACATTGCATCACTTTTACCTTATTATTGCTCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53810.p1 GENE.S_Transcript_53810~~S_Transcript_53810.p1 ORF type:complete len:110 (+),score=6.00 S_Transcript_53810:851-1180(+)
MSSSYWRHLCSRGQYLVYLKEEKNSRNCLFPPAEEHLFSCYMLIFSFIMYLLLLILWYRYLQKDKVNGPEGHTVMYELAERALDDELSQKVKDNIAQVHCITFTLLLLS*

Click here to download the sequence:
Link to NCBI Protein BLAST