Transcript Information: S_Transcript_53810.p2


Annotated TAIR IDAT1G34770.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: MAGE protein (InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104; Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:12746624-12748449 | Forward length=237
E-Value7E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.7837061972029
Replicate 25.6238483185822
Replicate 34.1586561757139
Condition 2: 8 Hour
Replicate 14.3905215358803
Replicate 29.4312695245906
Replicate 34.8065146560252
Condition 3: 24 Hour
Replicate 13.2124828662639
Replicate 23.5551076982506
Replicate 34.2036740675193


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53810.p2 GENE.S_Transcript_53810~~S_Transcript_53810.p2 ORF type:complete len:102 (+),score=23.36,MAGE|PF01454.15|9.8e-13 S_Transcript_53810:333-638(+)
ATGGGTGCAAGTGGTGAAGATTTTTCTCAGTTTGACTTGTCCACAGAGGAGAAGGACCGACTTGTTGCTGAAGTAGTTCGCTATGTGCTTTTCAAAACCCACCAGAGCTCTGGATGCCCTATCAAAAGGGAGGAGCTTACCCAAATTGTGACCAAGAATTATCGACAACGAGCTCTCCCTGCTGCCGTTATCAATGAGGCCAAAGCGAAGCTTGCAAATGTTTTTGGCTATGAATTGAAGGAACTACAGCGTTCTCGTCCTTCCACAAAAAAACCAATCTCGCTCCTCCCAACTCAGTGCTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53810.p2 GENE.S_Transcript_53810~~S_Transcript_53810.p2 ORF type:complete len:102 (+),score=23.36,MAGE|PF01454.15|9.8e-13 S_Transcript_53810:333-638(+)
MGASGEDFSQFDLSTEEKDRLVAEVVRYVLFKTHQSSGCPIKREELTQIVTKNYRQRALPAAVINEAKAKLANVFGYELKELQRSRPSTKKPISLLPTQCC*

Click here to download the sequence:
Link to NCBI Protein BLAST