Transcript Information: S_Transcript_53816.p1


Annotated TAIR IDAT1G34770.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: MAGE protein (InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104; Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:12746624-12748449 | Forward length=237
E-Value4.9E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3596572140677
Replicate 29.6290988323052
Replicate 311.253194898468
Condition 2: 8 Hour
Replicate 112.46993162612
Replicate 214.408987259485
Replicate 312.374030177468
Condition 3: 24 Hour
Replicate 111.015004810935
Replicate 211.427938888074
Replicate 310.580433881807


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53816.p1 GENE.S_Transcript_53816~~S_Transcript_53816.p1 ORF type:complete len:236 (+),score=49.42,MAGE|PF01454.15|3.4e-41 S_Transcript_53816:324-1031(+)
ATGGGTGCAAGTGGTGAAGATTTTTCTCAGTTTGACTTGTCCACAGAGGAGAAGGACCGACTTGTTGCTGAAGTAGTTCGCTATGTGCTTTTCAAAACCCACCAGAGCTCTGGATGCCCTATCAAAAGGGAGGAGCTTACCCAAATTGTGACCAAGAATTATCGACAACGAGCTCTCCCTGCTGCCGTTATCAATGAGGCCAAAGCGAAGCTTGCAAATGTTTTTGGCTATGAATTGAAGGAACTACAGCGTTCTCGTCCTTCCACAAAAAACCAATCTCGCTCCTCCCAACTCAGTGCTGCTGATGCCAAATCGTATATTATATTAAGTCAACTGCCTTCTGAAGTGTATCGCAAGTATGTTGAGGATATAAATACTGCACACCTTACTGGATTTACTTTTGTTATTGTCAGTATAGTGCACCTTGCTGGAGGGAAAATTTCAGAAGAAAATCTATGGCACCATCTGAGAAGGCTGGGGTTGCAAGAAACTGATGAAAGCCATCCAGTCATAGGAAATGTCAAGCTCTTACTGGAGGCACTTGTGCAGCAAAGATATCTCCAGAAGGATAAGGTTAATGGCCCGGAAGGACATACTGTTATGTATGAGCTTGCTGAGAGAGCATTAGATGATGAACTTAGTCAAAAAGTTAAAGACAACATAGCACAGGTACATTGCATCACTTTTACCTTATTATTGCTCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53816.p1 GENE.S_Transcript_53816~~S_Transcript_53816.p1 ORF type:complete len:236 (+),score=49.42,MAGE|PF01454.15|3.4e-41 S_Transcript_53816:324-1031(+)
MGASGEDFSQFDLSTEEKDRLVAEVVRYVLFKTHQSSGCPIKREELTQIVTKNYRQRALPAAVINEAKAKLANVFGYELKELQRSRPSTKNQSRSSQLSAADAKSYIILSQLPSEVYRKYVEDINTAHLTGFTFVIVSIVHLAGGKISEENLWHHLRRLGLQETDESHPVIGNVKLLLEALVQQRYLQKDKVNGPEGHTVMYELAERALDDELSQKVKDNIAQVHCITFTLLLLS*

Click here to download the sequence:
Link to NCBI Protein BLAST