Transcript Information: S_Transcript_53821.p1


Annotated TAIR IDAT1G34770.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: MAGE protein (InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104; Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:12746624-12748449 | Forward length=237
E-Value6.7E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4652345358308
Replicate 22.068386521017
Replicate 32.0171742591438
Condition 2: 8 Hour
Replicate 14.3317199081676
Replicate 26.7581626099174
Replicate 33.4416212278876
Condition 3: 24 Hour
Replicate 14.2096910893333
Replicate 22.3608137058695
Replicate 33.6782148090794


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53821.p1 GENE.S_Transcript_53821~~S_Transcript_53821.p1 ORF type:complete len:192 (+),score=46.75,MAGE|PF01454.15|3.5e-34 S_Transcript_53821:333-908(+)
ATGGGTGCAAGTGGTGAAGATTTTTCTCAGTTTGACTTGTCCACAGAGGAGAAGGACCGACTTGTTGCTGAAGTAGTTCGCTATGTGCTTTTCAAAACCCACCAGAGCTCTGGATGCCCTATCAAAAGGGAGGAGCTTACCCAAATTGTGACCAAGAATTATCGACAACGAGCTCTCCCTGCTGCCGTTATCAATGAGGCCAAAGCGAAGCTTGCAAATGTTTTTGGCTATGAATTGAAGGAACTACAGCGTTCTCGTCCTTCCACAAAAAACCAATCTCGCTCCTCCCAACTCAGTGCTGCTGATGCCAAATCATATATTATCTTAAGTCAACTGCCTGCTGAAGTGTATCGCAAATACGTCGAGGATATAAATACTGCACAACTTACTGGATTTACTTTTGTTGTTGTCAGTATTGTGCACCTTGCTGGAGGGAATATTTCAGAAGAAAATCTATGGCACCATCTGAGAAGGCTGGGGTTGCAAGAAACTGATGAAAGCCATCCAGTCATAGGAAATGTCAAGCTCTTACTGGAGGCACTTGTGCAGCAAAGGCCAGTATTTGGTGTATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53821.p1 GENE.S_Transcript_53821~~S_Transcript_53821.p1 ORF type:complete len:192 (+),score=46.75,MAGE|PF01454.15|3.5e-34 S_Transcript_53821:333-908(+)
MGASGEDFSQFDLSTEEKDRLVAEVVRYVLFKTHQSSGCPIKREELTQIVTKNYRQRALPAAVINEAKAKLANVFGYELKELQRSRPSTKNQSRSSQLSAADAKSYIILSQLPAEVYRKYVEDINTAQLTGFTFVVVSIVHLAGGNISEENLWHHLRRLGLQETDESHPVIGNVKLLLEALVQQRPVFGVS*

Click here to download the sequence:
Link to NCBI Protein BLAST