Transcript Information: S_Transcript_53854.p1


Annotated TAIR IDAT1G09230.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2979637-2982563 | Reverse length=442
E-Value7.5E-138
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.780914559523
Replicate 28.7829576263992
Replicate 37.811732162799
Condition 2: 8 Hour
Replicate 19.5760510659737
Replicate 211.96965150151
Replicate 312.626584887027
Condition 3: 24 Hour
Replicate 18.0700843468437
Replicate 29.0943957280884
Replicate 37.9521732360079


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53854.p1 GENE.S_Transcript_53854~~S_Transcript_53854.p1 ORF type:5prime_partial len:314 (+),score=76.87,RRM_1|PF00076.18|1.9e-09,RRM_6|PF14259.2|6.5e-07 S_Transcript_53854:3-944(+)
AAGCCTGAACCAGTGGCAGAGAAGCTTGGAGTTGATTACCCTTTTCCTCCCCATCTCGAGTATGCTTATCCTCCACCAGATGGGAATATATTGACCAATATTGTTAATGCTCTTATAGCCGTTCCTCGCTTTTACACCCAGGTGTTGCACTTAATGAACAAAATGAACATTCCAGCTCCATTTCGCATGGCGTTACCAACTCCGCCTCTACCATCTGCACCTGCCCCAGTGCCGCCCCCGTTGCCCCTGGTGACGGAGAAACCTCACCCAGGAAATCTGTCCAGTGATGAGTCGGAAATGGAAACTTCTGATGAGGAGGGTGATGATGGAGCTCAAACACAGAGAAAGCGGATCAAGCGAGAAGTTATTGTAGGCCCTGGCATAGATAAAGATGTGCCTCATGAGGCTGTTGGGCTTAAACCTGCCACTTTGGTTCCAAAGGAGATTCCAATAATAAAGAAGAAAAATCCTGTTTTGCAGATCAAAATCAGCGCGAAAAAGGTGCAGCATGAAGCTAATGAGGCTGGCACTGCAAAGGAACCTGAGGAGGAGTTAGCCCCAGATATTAAACCATATGCTAGTGTTGAGCAGATAGAGTCTCAGAAATTGCCGCCTGAGGAGATACTGTCACTCCCAATGTTCAAGAATTACTCTGCTGGAAATCCTGCGTGTGTGCTGTACATAAAGAACCTGGCAAAGGATGTGGTCGTCGATGATTTCTTTTTCATTTTTGGATCGTTATTTGGAAGCATTGATGAGGCTAAATCAGGTCTTAACGTGAAGCTGATGCAGGAGGGAAGAATGAGGGGCCAAGCTTTTGTGACATTTCCATCAGTTGAACTTGCACACCGTGCTTTGAATCTGGTAAATGGATATGTCTTCAAAGGCAAACCGATGATCATCCAGTTTGGCCGTAATCCTGGGGCTCCCAAATCAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53854.p1 GENE.S_Transcript_53854~~S_Transcript_53854.p1 ORF type:5prime_partial len:314 (+),score=76.87,RRM_1|PF00076.18|1.9e-09,RRM_6|PF14259.2|6.5e-07 S_Transcript_53854:3-944(+)
KPEPVAEKLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPSAPAPVPPPLPLVTEKPHPGNLSSDESEMETSDEEGDDGAQTQRKRIKREVIVGPGIDKDVPHEAVGLKPATLVPKEIPIIKKKNPVLQIKISAKKVQHEANEAGTAKEPEEELAPDIKPYASVEQIESQKLPPEEILSLPMFKNYSAGNPACVLYIKNLAKDVVVDDFFFIFGSLFGSIDEAKSGLNVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQFGRNPGAPKSS*

Click here to download the sequence:
Link to NCBI Protein BLAST