Transcript Information: S_Transcript_53888.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5963515182676
Replicate 22.9814580483128
Replicate 33.3645532044406
Condition 2: 8 Hour
Replicate 13.3140809276626
Replicate 24.3836730442708
Replicate 32.8805199466191
Condition 3: 24 Hour
Replicate 13.8376146672665
Replicate 24.1346142740634
Replicate 35.2829957875581


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53888.p1 GENE.S_Transcript_53888~~S_Transcript_53888.p1 ORF type:5prime_partial len:148 (+),score=36.48 S_Transcript_53888:3-446(+)
GTACTTGAAGATCCTCCTGGGAGAGATGAGATTTTTTGTGGAATTTCTGAAGTGCGGCAGTATGACATGCACTTGTATCTTCCTGCAGCCAAGTATGCTGTGGATACATACAACAACATCAAGAAAACCAATTTGGAATTTGTGGCGATTGATAAGATGTTCATGTGTTTGTGGACTGATTGCGTTTTACATATGACGCTCACGGTCAAGGATAATGACAATGGTGGCAAGCAAAGAACCTATCTAGCTTGTGTATGGGATGACTATCATGGCTTTGTGTTGGGAATTTTTCTTGAAAAGGATGATAAGATTCTCCCTTTTCTGAAGCGTGAAGCAAGCAAGAAGAGGCCAAGGGAAGAGGTGATCAAGAAAAAGGCAAAAGGAATCTTTGTACTTGAAGATGAGTGGATAGAGACATCCGAAGAATTCTCAGGGAACGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53888.p1 GENE.S_Transcript_53888~~S_Transcript_53888.p1 ORF type:5prime_partial len:148 (+),score=36.48 S_Transcript_53888:3-446(+)
VLEDPPGRDEIFCGISEVRQYDMHLYLPAAKYAVDTYNNIKKTNLEFVAIDKMFMCLWTDCVLHMTLTVKDNDNGGKQRTYLACVWDDYHGFVLGIFLEKDDKILPFLKREASKKRPREEVIKKKAKGIFVLEDEWIETSEEFSGNE*

Click here to download the sequence:
Link to NCBI Protein BLAST