Transcript Information: S_Transcript_53910.p1


Annotated TAIR IDAT5G45170.1
Annotated Gene NameHaloacid dehalogenase-like hydrolase (HAD) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18270555-18273129 | Reverse length=372
E-Value7.5E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.754741851762
Replicate 243.072183327138
Replicate 345.446423930146
Condition 2: 8 Hour
Replicate 149.947797480181
Replicate 255.840608938946
Replicate 352.978645108402
Condition 3: 24 Hour
Replicate 144.906590730001
Replicate 250.257152461078
Replicate 346.764480210016


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53910.p1 GENE.S_Transcript_53910~~S_Transcript_53910.p1 ORF type:complete len:377 (+),score=83.55 S_Transcript_53910:120-1250(+)
ATGTCTGCGATTGTAGCTTCAACTCTGCGCTACTCCTTCCAGTGCGCCATCAATGACAGATCCTCTCAAGTAACAAGAACCCAGAAAGCCCGTTACTCCTGGTTTTCATCTCCTTTTCCCTCTATCGCTTTTCTCAGACCCCTAAATTTCCGTCCTAGAGGTCGATTCCAAAATGGGTTTATCTCCTGTAGTTTCCTTCCCACTTCTTCTGACTCTAGCTCCTCTGAACGGGTTGCCGTTCTTCTTGAAGTTGACAAGGTCCTTTTGGATGCCTATCAATCTGGGAATCGCCAGGCCTTCAATGTAGCATTTCGAAAGCTTGGGCTGGACTGTGCAAATTGGACAGAGCCTATATATACAGACCTTTTAAGGAGGGGTGATGGGAATGAAGAAAGAATGCTTGCTCTGTACTTTAACCGGATTGGTTGGCCAACATCTTTGCCCACCAGTGAGAAAGAATCATTCATGAAAAGTGTTCTGCAGGAAAAGAAAAAGGCGGTGGTTGATATTTTGATGTCAAAGGATACGCCTTTACGACCTGGTGTTGAAAAATTTATCGATGATGCACTTCACGAGGGAATAATTGTGGTTATTGTGACTGCCTTCAGTAATGTTGGGGAAGAGACTGCAAGAGTAATTGTTGAGAAACTTGGTCATGAAACACTGTCAAAAGTGAAGATTGTTGGGAAAAAAGAGATAGCGAATAGCTTTTATGGGCAACTTGAACGTGGAGTCCCAAAACCATCAGGTCCATTTGAGGATCTTGCTAATGAAGCAAGCAAAGCAGCTGCTGCTGAGAAAAAAAGGATTGCTGAGGATGTGGCTTCCATGCTTAAGTTGCGTGTTGACATAAACACTATTCCATATGAAAGTATGCAGGAGATCTTTACTGCATTACGAGCAGGTGCAGAAAATGCAGATGTAGCTGTTTGCAACTGTGTGCTTATTGCTGGAAGTCAACTTGCAGTTGCCGCTGCTGAGATAATTGGGATGCCTTGTTTTTTCCTTCGGAGCAGGTTAACATCTAGAGCCGAGCTCCCGTCATCAGTTTCTGTCATGGACGGTTTTGGAAATGCTTACCTGACAATATCAAAAATACGGTCAAAGCTTTCAAGTTCCTCTGGAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53910.p1 GENE.S_Transcript_53910~~S_Transcript_53910.p1 ORF type:complete len:377 (+),score=83.55 S_Transcript_53910:120-1250(+)
MSAIVASTLRYSFQCAINDRSSQVTRTQKARYSWFSSPFPSIAFLRPLNFRPRGRFQNGFISCSFLPTSSDSSSSERVAVLLEVDKVLLDAYQSGNRQAFNVAFRKLGLDCANWTEPIYTDLLRRGDGNEERMLALYFNRIGWPTSLPTSEKESFMKSVLQEKKKAVVDILMSKDTPLRPGVEKFIDDALHEGIIVVIVTAFSNVGEETARVIVEKLGHETLSKVKIVGKKEIANSFYGQLERGVPKPSGPFEDLANEASKAAAAEKKRIAEDVASMLKLRVDINTIPYESMQEIFTALRAGAENADVAVCNCVLIAGSQLAVAAAEIIGMPCFFLRSRLTSRAELPSSVSVMDGFGNAYLTISKIRSKLSSSSGR*

Click here to download the sequence:
Link to NCBI Protein BLAST