Transcript Information: S_Transcript_53938.p1


Annotated TAIR IDAT1G78955.1
Annotated Gene Namecamelliol C synthase 1
Annotated Gene Symbol(s)CAMS1
Annotation TypeOrtholog
Chromosome Positionchr1:29689153-29694255 | Reverse length=769
E-Value6.9E-146
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17225243517916
Replicate 28.4966730011141
Replicate 30.35811138026409
Condition 2: 8 Hour
Replicate 10.069014208146062
Replicate 20.14480160931862
Replicate 30.13796665116493
Condition 3: 24 Hour
Replicate 15.5142424345189
Replicate 23.7406290951253
Replicate 32.2038679577286


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53938.p1 GENE.S_Transcript_53938~~S_Transcript_53938.p1 ORF type:5prime_partial len:309 (+),score=52.33,SQHop_cyclase_C|PF13243.2|8.5e-49,Prenyltrans|PF00432.17|1.7e+02,Prenyltrans|PF00432.17|1.2e-11,Prenyltrans|PF00432.17|7.7e-12,Prenyltrans|PF00432.17|4.1e+02,Pec_lyase|PF09492.6|0.12,Pec_lyase|PF09492.6|0.37,Pec_lyase|PF09492.6|1.6e+02 S_Transcript_53938:2-928(+)
CAGGTCAGGGATAACCCATCTGGAAACTTCAGAGAGATGTATAGGCACATATCTAAAGGTGCCTGGACTTTCTCGATGCAAGATCATGGCTGGCAAGTCTCTGACTGCACTGCAGAAGGGCTCAAGACTGCACTTCTATTCTCACAAATGTCCACAGAAATTGTGGGGCCACAAATTGAAGCAGACAATTTGTATGATGCTGTAAATGTCATCCTTTCTTTGCAGAGTGAAAATGGTGGTTTCCCAGCCTGGGAGCCCCAGAGAGCATTTCGTTGGATGGAGAAATTCAATCCAACGGAATTCTTTGAAGATGTATTGATTGAAAGAGAGTACGTTGAGTGCACTTCCTCAGCAATTCAAGGCCTAGTGCTCTTTAAGAAGTTTTACCCAGGATATCGGAGGAAAGAAATTGAAAGTTGCATCTCTAAGGGGCTACAATATATTGAAGAGGCTCAGAATCCTGACGGTTCCTGGTTTGGTTGTTGGGGGATCTGTTTCACTTACGGAACATGGTTTGCAGTGGAGGCACTGGCAGCTTGTGGCAAGAACTACCATAACAGCCCTGCATTGCACAAGGCTTGTAAGTTCTTGCTATCCAAGCAGCTGCCTGATGGTGGATGGGGAGAAAGTTACCTCTCTAGCACAAACAAGGTTTACACAAACTTAGAGGGAAACAGGTCAAATTTGGTGAACACTTCGTGGGCTTTGTTGGCTCTTATAAAGGCTGGACAGGCAGACCTGGACCCAACCCCCATCAAACGTGGGGTGAGAATACTAATCAACTCGCAGATGGAGGATGGGGACTTTCCGCAACAGGAAATCACAGGAGTATTCATGAAGAATTGCACCTTAAATTACTCATCATACCGGAACATCTTCCCCATATGGGCTCTGGGAGAATATAGTCGTTTACAAGCAGGAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53938.p1 GENE.S_Transcript_53938~~S_Transcript_53938.p1 ORF type:5prime_partial len:309 (+),score=52.33,SQHop_cyclase_C|PF13243.2|8.5e-49,Prenyltrans|PF00432.17|1.7e+02,Prenyltrans|PF00432.17|1.2e-11,Prenyltrans|PF00432.17|7.7e-12,Prenyltrans|PF00432.17|4.1e+02,Pec_lyase|PF09492.6|0.12,Pec_lyase|PF09492.6|0.37,Pec_lyase|PF09492.6|1.6e+02 S_Transcript_53938:2-928(+)
QVRDNPSGNFREMYRHISKGAWTFSMQDHGWQVSDCTAEGLKTALLFSQMSTEIVGPQIEADNLYDAVNVILSLQSENGGFPAWEPQRAFRWMEKFNPTEFFEDVLIEREYVECTSSAIQGLVLFKKFYPGYRRKEIESCISKGLQYIEEAQNPDGSWFGCWGICFTYGTWFAVEALAACGKNYHNSPALHKACKFLLSKQLPDGGWGESYLSSTNKVYTNLEGNRSNLVNTSWALLALIKAGQADLDPTPIKRGVRILINSQMEDGDFPQQEITGVFMKNCTLNYSSYRNIFPIWALGEYSRLQAGR*

Click here to download the sequence:
Link to NCBI Protein BLAST