Transcript Information: S_Transcript_5397.p1


Annotated TAIR IDAT1G27850.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.1); Has 9215 Blast hits to 5316 proteins in 473 species: Archae - 6; Bacteria - 773; Metazoa - 3392; Fungi - 1710; Plants - 539; Viruses - 143; Other Eukaryotes - 2652 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9699265-9703701 | Forward length=1148
E-Value4.2E-229
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.445109999024
Replicate 214.497857374166
Replicate 315.224862860681
Condition 2: 8 Hour
Replicate 113.124741089277
Replicate 212.778364934844
Replicate 313.396418112853
Condition 3: 24 Hour
Replicate 114.430517653075
Replicate 213.692719494043
Replicate 312.019880536813


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5397.p1 GENE.S_Transcript_5397~~S_Transcript_5397.p1 ORF type:complete len:1152 (+),score=281.68 S_Transcript_5397:615-4070(+)
ATGCCTCCTTCTCCATCCTTGAGGCGTTCTCCCTCAATGGAGCCTCATGGTGATAGCCACAAGAGGGGGCGCAGCCTGGAGAGTGGGATATCATTTAAAGAGAAAGATGATGATCTTGCTCTATTCAATGAGATGGAAACTAGAGAAGCAGAAAACTTTCTTCTCCAGCCTACAAATGATTTTGAAGATATATTCTCTTCCAAAGTGAAGTCGTTTCCCGATTTGAAACTTGGAATAAATATACCTGCTCGGGGAGAGAGTAGTGATCTGCTCAATGCCGATGGTGACAAGAATGATTATGAATGGTTATTAACTCCTCCAGATACCCCCCTTTTCCCATCATTGGATGATGAGCCTACACCTTCTGATGTCTTACACAATGGTAGAGCTCGAAGCCGGCCTATTTCCATTTCAAGATCATCTACAATGGAGAGAAGCCAAAGAAGCAGTCGAGGCAGTCCCAGTCCTCAGCGTTTGAGCCCATCCCCTCGATCAGGAAGTGGTACATTTCGGGGTAGACCATCTTCAGCCCCCCATCCTAGTCCTGTCCCTTTACGTCCGAGTACTCCGTCACGAAAACTATCACCTCCTCCAGCCAAGCCTTCAACACCTCCTCCAAGATCTTCAACACCCACATCTCGGAGGTTAAGTGCTGACCCTGGGGTTACAGCTGGGTTGAGGGGAACCTCCCCAGTAAGAACAAGTCGTGGGAACTCTACGTCACCGAAAATTAAGGCTTGGCAGTCAAATATTCCAGGTTTCTCCTTGGAGGCACCTCCCAACCTTCGCACTTCTTTGGCTGACCGCCCGGCATCTTACGTTAGGGGATCTTCACCAGCATCGAGAACAAGTAAAGATTCATCCTCAGTACGTGGCAGGCAATCAATATCTCCAACTGCTTCTAGAAGCATCAGTTCATCACATAGTCAACACAGAGACAGGCTGAGTTCACATAGTAAAGGTTCTGTAGCATCGTCAGGTGATGATGATGCAGATTCATTACTGTCTGTTCCAATGAATGTTTCTGACCGTCCTATGTCAAGAAGAGGAGTTGCCGGTTCTCCCAATAGCAGACCATCAACTTTTTCCAAGAAACCTACCAAGACATTTCCCCCTAGTTCTGCTCCAAAGAGATCTTTTGACTATGCGATGCGGCAAATGGATCGGAAAAGTCCTCAGAATATGTTCAGGCCCCTCTTATCTAGTGTCCCCAGCTCCACTTTCTATGCTGGAAAGGCCAGTGCTGCCCATCGTTCTATGATCTCAAGGAACTCTTCAGTGACTACCAGTAGTAATGCTACTTCTGACCAAGCTACTAGTGGTGCACATGATACTGAAGGGAGTGATTTGTATCAGGATGATATGGCAAGTGATTGTGCACAAACACATTTTCCAGAGATCCAAGATGAGCTATTTGCCTTTGATAAGATGGATGTTACAATGGAAGATGATAGAGCCGAAGCCCAGCTTGGTGAACCTGATAAAAGCCGTGCATTTGTATCTCATCCTGGTGATTCAGAGGAATCTAGTTTCCAAGTTTGTGCTGTGCCAGTTGGTGCATCTTCTGAGGCCATCAATGTGCAAAATGATTTGGTAGAAACTGGAAGCCATGAAAACACATTACGCTGTTCTAGGTGTGGCTGCTGGTATCATGCTGGTGAGCTGACGGAAAGTGAACAAAATACATGTCCAAAATGCAAGCAAAAAGGGGAGTATTTGACCTGTGGTGCCTCATTGATTGGGATCGATGCCACTGAGAATGCCTCAGCCCCTTTGTTGAACACCTTTGAGGAATCAAATGTGCTAGAGCCCATTCATACTTTTCCACAATTGCATAATCCTGTGGGCATTGCTGAGCCAATTAACATATCACAGATCGCCCCACATGAAGAGAATAGACGTGAAGCCCAGGCCCAGGGTCATGGTACTCTGCATGTGCAAAGTTGCTCAGACAATTTTCTTACAGCGTCGGTGGGGGAAGAAAGCACACAGATGCTTTCCAAGCAGCATATAATCGAAGAACAGAGAACTGTTCACAGCGCATCTGACGCTGCGCCTCAGTTTCACAAATGTAGTGATAGATCGGATCCAAATATAGATGTAGCTGAAGGTACTGGCATTTCAGTGCTTCTTTTGAAGCAGTCCAGTAGTGTCAAAGGGCCTCTTGTTCATGGTAGGACCATCAGCAGCAGTGCTATATCTTTTGATGATTTATCTTATGCAAGGGACTTTACCAGTTCTATGAGGAGCTCAACTGGTCATGGCAGCATTTCTACTTCATCTTCCATTGATATGGCCTCCGGTAGACATGGTGAAATGTTTGTACAGAGACAGTTAAGTGGCGGCAGAAGATCTGATACAAGCTCTAAGCCTCAGAGCACTATAACTTCTTGCTCAGGAACTTCAATGCAGGTGTGTCAAAGTTTTGGAGCTTCAACAAGTTCCCAAGAAGAAAATTTTGATGGTTCTGTCAGCAACATGAGGCATATTATTGCAGGGGAGACGCCCAGGTCCACTCCTGATAAAGTACTAGCTCCGGAAAATACAGAAATGCTTGATGCAGTTCCTTCTGTTGCCAGGGTAGCACTATCTGAAGGAGCTGATGATGGCATCTGTATGAGTTCTAGAGAAAAGGATGATTCTGTGACAGTCATCCCTATGGAGGACACTGAGTTGGCCAATTCTCAAGCCTCAATGGGGATGGATGAAGGCAACGTTCTGCATGAAATTGATGAAGACCTGCAAAAGAGGGTACAAAGTGTTCCAAACGTAGAAGATTCAGCTCTCCTTGAATCTTTTGTGGCAGAAGAAAATAAAATGCCAGACAACAAGGTTGATCAAATGGATGTTATGGTAGATCCTCTTCAACATTCTTTATCAACAGTGTCTGTAACAGAAATTGACAATTCTCATCCTAGCTCCCCAAGGTCACAGATCGAGACAGTCTCCATAGAGGAATCGGAGGATGCTTCAGCTGTGATGTGTCCTGCTAATGATGCCAAGGATTCAGTTCATAGTGATGGAATTGTTGAGGAATCGACTGTGACGGTGGAGGATCAGGTAGGGAGGAGGACAAGAAGTCTGACGTTAGAAGAAGCAACAGATACAATTCTATTTTGCAGCTCCATCATTCATGATCTAGCTTATAAGGCAGCTAGTATAGCAATTGAGAAAGAAAAAGAAAATCTAGAACCATTAGAAGGTTCCAGGCCCACAGTCACGATTCCAGAAAAACGTAACTCGAACAGAAGGGAACCTCCTGCCACTACTACTGGTAGGGCGACAAAACCTCAAAAAGCCAGAAAGAGGCTCACAGAAACAGAGGCGAAGCCTCCTCTTGCAAACCATGACAAGAAGTCTAATGAACCTGTGGTTCGTAATGTTGGGCTTCCTAACAATGGCGATAGCATGAAACCCCCAAAGTTGGAATCCAAGTGCAACTGCACAATAATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5397.p1 GENE.S_Transcript_5397~~S_Transcript_5397.p1 ORF type:complete len:1152 (+),score=281.68 S_Transcript_5397:615-4070(+)
MPPSPSLRRSPSMEPHGDSHKRGRSLESGISFKEKDDDLALFNEMETREAENFLLQPTNDFEDIFSSKVKSFPDLKLGINIPARGESSDLLNADGDKNDYEWLLTPPDTPLFPSLDDEPTPSDVLHNGRARSRPISISRSSTMERSQRSSRGSPSPQRLSPSPRSGSGTFRGRPSSAPHPSPVPLRPSTPSRKLSPPPAKPSTPPPRSSTPTSRRLSADPGVTAGLRGTSPVRTSRGNSTSPKIKAWQSNIPGFSLEAPPNLRTSLADRPASYVRGSSPASRTSKDSSSVRGRQSISPTASRSISSSHSQHRDRLSSHSKGSVASSGDDDADSLLSVPMNVSDRPMSRRGVAGSPNSRPSTFSKKPTKTFPPSSAPKRSFDYAMRQMDRKSPQNMFRPLLSSVPSSTFYAGKASAAHRSMISRNSSVTTSSNATSDQATSGAHDTEGSDLYQDDMASDCAQTHFPEIQDELFAFDKMDVTMEDDRAEAQLGEPDKSRAFVSHPGDSEESSFQVCAVPVGASSEAINVQNDLVETGSHENTLRCSRCGCWYHAGELTESEQNTCPKCKQKGEYLTCGASLIGIDATENASAPLLNTFEESNVLEPIHTFPQLHNPVGIAEPINISQIAPHEENRREAQAQGHGTLHVQSCSDNFLTASVGEESTQMLSKQHIIEEQRTVHSASDAAPQFHKCSDRSDPNIDVAEGTGISVLLLKQSSSVKGPLVHGRTISSSAISFDDLSYARDFTSSMRSSTGHGSISTSSSIDMASGRHGEMFVQRQLSGGRRSDTSSKPQSTITSCSGTSMQVCQSFGASTSSQEENFDGSVSNMRHIIAGETPRSTPDKVLAPENTEMLDAVPSVARVALSEGADDGICMSSREKDDSVTVIPMEDTELANSQASMGMDEGNVLHEIDEDLQKRVQSVPNVEDSALLESFVAEENKMPDNKVDQMDVMVDPLQHSLSTVSVTEIDNSHPSSPRSQIETVSIEESEDASAVMCPANDAKDSVHSDGIVEESTVTVEDQVGRRTRSLTLEEATDTILFCSSIIHDLAYKAASIAIEKEKENLEPLEGSRPTVTIPEKRNSNRREPPATTTGRATKPQKARKRLTETEAKPPLANHDKKSNEPVVRNVGLPNNGDSMKPPKLESKCNCTIM*

Click here to download the sequence:
Link to NCBI Protein BLAST