Transcript Information: S_Transcript_53971.p1


Annotated TAIR IDAT3G09090.1
Annotated Gene Namedefective in exine formation protein (DEX1)
Annotated Gene Symbol(s)DEX1
Annotation TypeOrtholog
Chromosome Positionchr3:2782912-2787552 | Reverse length=896
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.531537451423
Replicate 224.527905709192
Replicate 325.696192062849
Condition 2: 8 Hour
Replicate 130.475054989512
Replicate 229.220883865743
Replicate 329.508754393935
Condition 3: 24 Hour
Replicate 123.089675734192
Replicate 221.600258407402
Replicate 323.193008430626


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53971.p1 GENE.S_Transcript_53971~~S_Transcript_53971.p1 ORF type:complete len:895 (+),score=220.90,VCBS|PF13517.2|0.35,VCBS|PF13517.2|0.005,VCBS|PF13517.2|1.1e+02,VCBS|PF13517.2|6.7,VCBS|PF13517.2|9.7e-05,VCBS|PF13517.2|6.2e-06,VCBS|PF13517.2|0.026,VCBS|PF13517.2|3.5e+02,FG-GAP|PF01839.19|0.24,FG-GAP|PF01839.19|14,FG-GAP|PF01839.19|3.8,FG-GAP|PF01839.19|0.00046,FG-GAP|PF01839.19|20,FG-GAP|PF01839.19|0.0052,PQQ_3|PF13570.2|14,PQQ_3|PF13570.2|13,PQQ_3|PF13570.2|8.1,PQQ_3|PF13570.2|2.3e+02,PQQ_3|PF13570.2|40 S_Transcript_53971:279-2963(+)
ATGTCACTCTCTGCGATTAAGAGGGTGTTGATTCTTTCCCTCTTGTTCACTAACATCATCACAAGTCCCAACCATGCTGTTGCACAGCAGGAAGCCACAAGAAACAAGTTCAGAGATAGAGAAGCTACTGATGATGCTACTGGCTACCCGCATCTGGATGAGGATGAATTGTTGAACACACAGTGCCCGCAGCATTTAGAACTACGATGGCAAACGGAAGTAAGCTCCAGTATCTATGCAACTCCTTTAATTGCAGATATTAACAGTGATGGAAAGCTAGATGTTGTGGTTCCTTCATTTGTTCATTACTTGGAAGTATTAGAAGGATCGGATGGGGATAAGATGCCAGGTTGGCCTGCTTATCATCAGTCAACTGTTCATTCTAGCCCTCTCCTATATGATATTGACAAAGACGGTGTTAGAGAAATAGCCTTAGCTACTTATAATGGTGAAGTGCTCTTTTTCAGAGCTTCAGGCTATATTATGTCGGACAAACTAGTTGTACCTCGGAGGAGAGTTCGTAAAAATTGGTATGAGGGGTTAAACCCAGATCCCGTGGATCGCTCTCATCCGGATGTTCATGATGACGAGCTTGTGGAAGAGGCCAATGAAATGAACTTGCTATCCCACTTAAATGCTACTGGAATGAGATCAAATGTACCTGCTACTCCATCAGGTGGAGGACACTTGGTGATGAATTCATCAACGCCTGAAGGAGGAAGCAAGAAAGATGTTGAAGCAGATTTGAACCTTGGAATGCTGAAGAACCCAAATGTATCCATGTCAATCCCCATAGTGAATGCATCAGTTTCTGTGAATGAGACGAAAGCAAATGAAACTCCATTAGGAGAAAATGTGAAGCTAACAGATGCAGTTGGTAATTCTTCTGCAAGTACTATATCAGGAGGAACTATCAAGTTGGAGGACAGAATGAATAAATCTTCTGCAAGTATTGGGTCAGAAAGTATCATCAGTACAGAGAACAGCACAAGCTCTGCAAGACGACTGCTTGAAGATATTGTTTCAAAAAATGTAAATCATGGTAGTGAAAATGTTCAAACTGCAACTGTGGAGAATGAAGATGCTCTGGAAGCAGAAGCAGATTCTTCCTTCGAGTTATTTCGTGATACTGATGAGTTGGCAGATGAATATAGCTATGATTATGATGATTATGTGGATGAAAATATGTGGGGGGATGAAGATTGGGTTGAATCTCAACACGAGACTGTGGAAGACTATGTTGATATTGATTCACATATTCTTGGTACTCCTGTAATAGCTGATATTGATAATGATGGAGTATCGGAAATGGTTGTTGCCGTATCGTACTTCTTTGATCGCGAGTATTATGAAAAGCCAGAGAATGTAAAAGAATTGGGAGGTATTGACATTGGAAAATATGTAGCTGGTGGCATTGTTGTTTTCAACCTTGATACAAAGCAAGTTAAGTGGACATCCCCCCTAGATCTGAGCACAGATGCTACAAAATACCGTGCATACATATACTCTTCACCAACTGTGGTTGATTTGGATAATGATGGGAAGCTGGACATTCTAGTTGGGACATCTTATGGCATGTTCTATGTGCTTGATCATCATGGCAAGGTGAGAGACGAGTTTCCTCTTGAAATGGCTGAAATTCAAGGGGCTGTGGTTGCAGCAGATATTAATGATGATGGTAAAATTGAACTAGTGACTGCTGATGTACATGGAAATGTTGCTGCATGGACTGCACAAGGAAAGGAAATATGGGAAACACATGTAAAGAGTCTTGTGCCACAGGGTCCCACAATCGGTGATGTTGATGGAGATGGCCATACAGATGTTGTGATACCAACTTTGTCTGGGAATATATATGTCCTTAGTGGCAGGGATGGGACACCTGTTCGCCCATATCCTTACAGGACTCATGGGAGAGTGATGAATCAGATTCTTCTTGTTGATTTGAGCAGACGTGAGGAGAAAAAGAAGGGACTTGCAATCGTTACAACATCATTTGATGGCTATCTTTATGTCATAGATGGACCTACATCTTGTGCTGATGTTGTTGATATTGGCGAAACATCATACAGCATGGTGCTGGCAGATAATGTTGATGGAGGTGATGATCTTGATCTTATTGTGACTACTATGAATGGGAATGTGTTTTGCTTTTCTACTCCTTCCCCACATCATCCGCTTAAGGCATGGAGATCAACTAACCAAGGAAGGAACAGTGTCGCAAGTAGGCATAATCGAGAGGGGATTTATGTGTTGCCGTCACATCGAAATTTCCATGATGAAGAAGGCAAGAACTTTTGGGTGGAGTTTGAGATTGTTGATAGGTATAGGCAACCATCTGGAACTCAAGCCCCATATAATGTCACGATAACCTTGTTGGTTCCTGGTAACCATCAAGGGGAAAGGAGTATAAAGCAAACTCAAATCTATGATGGTCCTGGGAAATATCGTATGAAACTTCCAACAGTCGGGGTGAGGACTACTGGGACAGTATTGGTTGAGATGCTGGACAGGAATGGGCTATATTTTTCTGATGAATTTTCACTTACATTCCACATGTATTACTACAAACTACTGAAGTGGCTCGTTGTTCTCCCAATGCTTGGGATGTTTGGCGTTCTTGTGATTCTTCGACCACAAGAGCCTGTGCCATTGCCTTCATTTTCAAGGAATACTGACTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53971.p1 GENE.S_Transcript_53971~~S_Transcript_53971.p1 ORF type:complete len:895 (+),score=220.90,VCBS|PF13517.2|0.35,VCBS|PF13517.2|0.005,VCBS|PF13517.2|1.1e+02,VCBS|PF13517.2|6.7,VCBS|PF13517.2|9.7e-05,VCBS|PF13517.2|6.2e-06,VCBS|PF13517.2|0.026,VCBS|PF13517.2|3.5e+02,FG-GAP|PF01839.19|0.24,FG-GAP|PF01839.19|14,FG-GAP|PF01839.19|3.8,FG-GAP|PF01839.19|0.00046,FG-GAP|PF01839.19|20,FG-GAP|PF01839.19|0.0052,PQQ_3|PF13570.2|14,PQQ_3|PF13570.2|13,PQQ_3|PF13570.2|8.1,PQQ_3|PF13570.2|2.3e+02,PQQ_3|PF13570.2|40 S_Transcript_53971:279-2963(+)
MSLSAIKRVLILSLLFTNIITSPNHAVAQQEATRNKFRDREATDDATGYPHLDEDELLNTQCPQHLELRWQTEVSSSIYATPLIADINSDGKLDVVVPSFVHYLEVLEGSDGDKMPGWPAYHQSTVHSSPLLYDIDKDGVREIALATYNGEVLFFRASGYIMSDKLVVPRRRVRKNWYEGLNPDPVDRSHPDVHDDELVEEANEMNLLSHLNATGMRSNVPATPSGGGHLVMNSSTPEGGSKKDVEADLNLGMLKNPNVSMSIPIVNASVSVNETKANETPLGENVKLTDAVGNSSASTISGGTIKLEDRMNKSSASIGSESIISTENSTSSARRLLEDIVSKNVNHGSENVQTATVENEDALEAEADSSFELFRDTDELADEYSYDYDDYVDENMWGDEDWVESQHETVEDYVDIDSHILGTPVIADIDNDGVSEMVVAVSYFFDREYYEKPENVKELGGIDIGKYVAGGIVVFNLDTKQVKWTSPLDLSTDATKYRAYIYSSPTVVDLDNDGKLDILVGTSYGMFYVLDHHGKVRDEFPLEMAEIQGAVVAADINDDGKIELVTADVHGNVAAWTAQGKEIWETHVKSLVPQGPTIGDVDGDGHTDVVIPTLSGNIYVLSGRDGTPVRPYPYRTHGRVMNQILLVDLSRREEKKKGLAIVTTSFDGYLYVIDGPTSCADVVDIGETSYSMVLADNVDGGDDLDLIVTTMNGNVFCFSTPSPHHPLKAWRSTNQGRNSVASRHNREGIYVLPSHRNFHDEEGKNFWVEFEIVDRYRQPSGTQAPYNVTITLLVPGNHQGERSIKQTQIYDGPGKYRMKLPTVGVRTTGTVLVEMLDRNGLYFSDEFSLTFHMYYYKLLKWLVVLPMLGMFGVLVILRPQEPVPLPSFSRNTDL*

Click here to download the sequence:
Link to NCBI Protein BLAST