Transcript Information: S_Transcript_54013.p1


Annotated TAIR IDAT1G60200.1
Annotated Gene Namesplicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22200882-22205241 | Reverse length=899
E-Value5.2E-243
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.339670100381
Replicate 232.02481443425
Replicate 332.180692554038
Condition 2: 8 Hour
Replicate 140.365917386002
Replicate 242.346713496625
Replicate 342.414186560932
Condition 3: 24 Hour
Replicate 138.172819364941
Replicate 234.862955052391
Replicate 332.428342806578


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54013.p1 GENE.S_Transcript_54013~~S_Transcript_54013.p1 ORF type:complete len:784 (+),score=250.01,PWI|PF01480.13|4.9e-13,RRM_1|PF00076.18|7.6e-09,RRM_6|PF14259.2|1.6e-05 S_Transcript_54013:2723-5074(+)
ATGTGTCTTTTAAATTATAATGCAGGTGTTCGCTATCAATATCCGCCCATGGCTAGGCCCCCATTCCTTCCACGTCCATCTGGTGCAGTTGGCACAGTTTCCCCACTTCCAAGACCTCCTTTCATGGGTGTTCGTCCTCCTGTGACTCTCCCAGTTGTAAGGCCCCCTGTTCTTCCAGTTGTTACACCAGCAGAGAAACCACAAACAACTGTTTATGTGGGCAAGATTGCTTCATCAGTGGAAAATGAATTTATTCGTTCTCTTCTGGAGCTATGTGGTCCAATAAAGAGTTGGAAACGTCCTCAAGATCCTTCAGATGGAACGCCGAGAAGATTTGGATTTTGTGAATTTGAATCTGCAGAAGGGGTCCTTCGTGCTCTTCGCCTACTGAGTAAATGCAACGTTGATGGTGAAGAGTTGGGGCTGAATATTAACCAAGCAACAAGAGAATATTTGGAACGTTATGTTGAGAAGAAGAAAGAGAACTTGAATAAACCAAGTGAAACTGGAGCTGTGGAAGCTAAGAAAGAGGGAGAGGGTGCAGCAGAGGTTGAAAAGAGTGAAGGCGATCAGAAGATTGAACCTGCTAAGCCTGCTGTAGAAGAGCCCAAAAAGGATGAAAATGAGACTGGAAACAAGGAAAATGATATGTCTGTATTTGGACTTGTGACTGATGACGACCGTGATGCTGACCGAGAGGCTCAGGAGAAGCTCACTAGGATGATAGAAGAACGCATAAAGACTAAACCTCCGCCTCCACCTCCACCGCCGGCGCAAAAGGTGGTTGATGGTGCCAACAACTCAAACTCTGAAGTGGCTGCGAAATCTGGGGACAAGGATTCAGATGTTGATGGGAGAAATGAGGAAAAGCATGATGATGAGACAACTAGTGAGACTAAATCTGCAAGTAGAGGTGGAACAGAGTCACCTGACAGGAGTCGTAGGTATGACAGCCGGGGCAGAGATAGGGAGCGAGAGCGTGATAAACGAGAGAAGGAGAGAGAGCTTGACAGACTAGAGAGAGAGCGAGAGCGAGAAAGAGCTAGGAGAGAGAGGGAGAGAGAGTTGGAGATTCAAAAGGCTGAGAGGTTTTACAAGGAGCGAGTTAAGGAATGGGAGGCTAGAGAAAAAGACAAGGAGCACAAACGGAAATATGAGAGGGAGAAGGAAAAAGAAAGAGAACGTGAACGGAGGAGGCTGATTGCAGAGCAAGAGGATGAAAGTGACAACGATTCTAGGAAGAGGAGACGCAAGTCTGAAATAGAGGATAAAAGGAGGCGGCGAAGAAGGGAAAAGGAAGAAGATTTGGCAGATAGACTTAAAGAAGAGGAAGAGATCGCAGAGGCCAAGAAAAGAGCTGAGGAGGAGCAGCAGAGGCAACAAGAGAAAGATGCACTTGAGCCTCCGCCAGTCCCAGTAGCTAATGGAGGTGAGGAGCATATGTCTGAAGATGTATCTACTGAGGTTAAACATAATATGGAACAGGCCCAGGACAATGATTCTGTGCCAGGAAGCCATACTGATGATGGTGTTCTAGAAAATGGCAGTAATGATGAAACAATTATGACATCTGGCCCAACAGCTGACATCAAGCCCAGTTGCAATGCCCCGACCAAAAAGCTCGGTTTTGGCTTAGTGGGGTCGGGGAAACGAACAGCCGTCCCATCTGTTTTCCATGAGGAAGAAGATGATGATGCACAAAAGGAAAAGAAGATGAGGCCTCTGGTACCAATTGATTATTCAACAGAAGAACTTCAGGCCATAAACTCGAATGATGGAGCGGCACCTCCCAACTCTGCTGCATCTGCTGAATCTGGTAAACGCATATCCAAGGACATCAAGTCTGATGCCGAAAGAGAAAGAAGTAGACGCTCTAATGATAGGTCAAGCCACCGTGACCGTGATGTCGATGATGCTCGAGCTAGGGAGGAGCAGACAGACAGGGATCATGGAACGGAGAGAGCAAGGAACCCAGACAAAAAGATTTTGGCGAGGAACCCAGACAAAAAGATTTTGGATGCAAAACAACTGATTGATATGATTCCGAAGACTAAAGATGACTTGTTCTCATACGAAATAAATTGGGCCATATACGATGAGAATCGGCTGCATGAAAGGATGAGACCCTGGATTTCCAAGAAGATTACAGAGTTTTTGGGAGAAGAGGAAACAACATTAGTGGAGTTCATAGTGGATAGATTCCGAGAACATGTAAAGGCAGAGAAGATGCTAGATGTGCTTCAGCAAATATTGGATGAAGAAGCTGAAATGTTTGTACTCAAGATGTGGCGGATGCTCATTTTTGAAATTAAAAGGGTTGAGACAGGTTTGGCGCCAAGGCCAGGTTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54013.p1 GENE.S_Transcript_54013~~S_Transcript_54013.p1 ORF type:complete len:784 (+),score=250.01,PWI|PF01480.13|4.9e-13,RRM_1|PF00076.18|7.6e-09,RRM_6|PF14259.2|1.6e-05 S_Transcript_54013:2723-5074(+)
MCLLNYNAGVRYQYPPMARPPFLPRPSGAVGTVSPLPRPPFMGVRPPVTLPVVRPPVLPVVTPAEKPQTTVYVGKIASSVENEFIRSLLELCGPIKSWKRPQDPSDGTPRRFGFCEFESAEGVLRALRLLSKCNVDGEELGLNINQATREYLERYVEKKKENLNKPSETGAVEAKKEGEGAAEVEKSEGDQKIEPAKPAVEEPKKDENETGNKENDMSVFGLVTDDDRDADREAQEKLTRMIEERIKTKPPPPPPPPAQKVVDGANNSNSEVAAKSGDKDSDVDGRNEEKHDDETTSETKSASRGGTESPDRSRRYDSRGRDRERERDKREKERELDRLERERERERARRERERELEIQKAERFYKERVKEWEAREKDKEHKRKYEREKEKERERERRRLIAEQEDESDNDSRKRRRKSEIEDKRRRRRREKEEDLADRLKEEEEIAEAKKRAEEEQQRQQEKDALEPPPVPVANGGEEHMSEDVSTEVKHNMEQAQDNDSVPGSHTDDGVLENGSNDETIMTSGPTADIKPSCNAPTKKLGFGLVGSGKRTAVPSVFHEEEDDDAQKEKKMRPLVPIDYSTEELQAINSNDGAAPPNSAASAESGKRISKDIKSDAERERSRRSNDRSSHRDRDVDDARAREEQTDRDHGTERARNPDKKILARNPDKKILDAKQLIDMIPKTKDDLFSYEINWAIYDENRLHERMRPWISKKITEFLGEEETTLVEFIVDRFREHVKAEKMLDVLQQILDEEAEMFVLKMWRMLIFEIKRVETGLAPRPGS*

Click here to download the sequence:
Link to NCBI Protein BLAST