Transcript Information: S_Transcript_54019.p1


Annotated TAIR IDAT1G73380.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1308 (InterPro:IPR010733); Has 162 Blast hits to 160 proteins in 67 species: Archae - 0; Bacteria - 2; Metazoa - 120; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:27589100-27590657 | Forward length=434
E-Value7E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2089842922482
Replicate 24.5346444940347
Replicate 34.8840447336017
Condition 2: 8 Hour
Replicate 14.4673742561583
Replicate 23.0064934930858
Replicate 33.8756086554511
Condition 3: 24 Hour
Replicate 16.3894125624663
Replicate 23.7623718822395
Replicate 33.3895237540472


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54019.p1 GENE.S_Transcript_54019~~S_Transcript_54019.p1 ORF type:complete len:253 (+),score=41.50,DUF1308|PF07000.7|1.5e-18 S_Transcript_54019:49-807(+)
ATGGACAGGGAAGAGGCAACAAAGAGGTGCAAATCAGCAGTGAAAAGAATCCATTCCTTGCCAACCTCCTCTAAAATCACAGCTTCCTGTAAAACAACTCTCCTTCGTTTGGTCAATTCTGAGCTCAATTTTCTCTCTCGCCTCTCTCTTTCTCCCTTACCCTATTCATCTTCAATCAGTTGTAATGTTGGTTATCTTGAGGCCATTGGTCACATACTTGAACAACCCTACATATCTGGAGTGTCCCGTATATGCAAGTGCATCCCCATATCATCTGAAACTAGTATTAGTGAGAGAAATGATTGCCAATATGAAACTGTTCATATTGGTATTGTTTGTAGTTTCCACAAAAGACCCACTTGGTTTATCGTGTCGGATCGAAACCCCAAGTATATATCTTGGAATGGTAAAGGGAAAAATGATAAGGGTCTTAGAAAGCGGATTGAAGGAATACTTCATGCTGCTCGGAATTCGCAGGCGCATAGGCCTGCCTTTGTGGTTTTGTTTTTTGCGAATGGACTTGAGTTGCGTTTGAATGAGATGGTGGTGAAGGAGTTCCGGTTCAGAGAGTTGAAATTGGATTTTTTGCATTATGATATTGAGTTTGTTGATGCATTAGATGGTGAATGGATCAATGTTCTCGGTAAATCATATCATAGAGCATGCATTCTGATTCGGGATGTTGATGATGCTCCAAGGACTTGTGGTAGAATTGATAGTGTGGCGGAATTGAGTTTCGGTTGTGTTTTGAATGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54019.p1 GENE.S_Transcript_54019~~S_Transcript_54019.p1 ORF type:complete len:253 (+),score=41.50,DUF1308|PF07000.7|1.5e-18 S_Transcript_54019:49-807(+)
MDREEATKRCKSAVKRIHSLPTSSKITASCKTTLLRLVNSELNFLSRLSLSPLPYSSSISCNVGYLEAIGHILEQPYISGVSRICKCIPISSETSISERNDCQYETVHIGIVCSFHKRPTWFIVSDRNPKYISWNGKGKNDKGLRKRIEGILHAARNSQAHRPAFVVLFFANGLELRLNEMVVKEFRFRELKLDFLHYDIEFVDALDGEWINVLGKSYHRACILIRDVDDAPRTCGRIDSVAELSFGCVLND*

Click here to download the sequence:
Link to NCBI Protein BLAST