Transcript Information: S_Transcript_5403.p1


Annotated TAIR IDAT4G28820.1
Annotated Gene NameHIT-type Zinc finger family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14230815-14232287 | Reverse length=173
E-Value1.4E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.318017714569
Replicate 28.4468965734485
Replicate 37.9040297501145
Condition 2: 8 Hour
Replicate 112.064077950835
Replicate 28.8209003208065
Replicate 312.180484345704
Condition 3: 24 Hour
Replicate 19.4869208302009
Replicate 28.936017135817
Replicate 36.6297945293448


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5403.p1 GENE.S_Transcript_5403~~S_Transcript_5403.p1 ORF type:complete len:175 (+),score=28.97,zf-HIT|PF04438.12|4.7e-10 S_Transcript_5403:392-916(+)
ATGGGTCCGCAGCAATGCAAGGTCTGCAACGAAGTAAAGTCAAAGTACAAATGTCCAGCATGCCTTATACCATACTGTTCCCTTGGTTGCTTCAAGAAGCATAAAGAAACTCCATGCGCTACTCCAAAGCCAGTAGTGTCTGATGAAGCTACGAAAAATTCTTGCCCTGTGCCAGTGTCTGGTGATGAAAAACCATCAATTCCGGAATCAGTCCCTGAGAGACCAATATATGTTGATGAACCAAGTGAAGTGTTGGAAAGGGCTCAACTTGAATCTATAGCTGCTTCATCTGAAATCAGAGACGCTTTAAAGAATGAAGACCTCCAGAAACTCATTCGCAGTATAGATAATTCTCCAAATGCAAAGGAACGTCTCAATGTCAGGAACTTGAAAAGGCTATGGGTTTGGATGTGTTCCGAATATTCGCTGACAAGGTTTTGTCCGCTGCAAATCCTTAGGGAGTGTCAGCTGCAAACGTCTACAATCCCTGCTCTTTCTGACTGGCTTCTGGGGAGCAACAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5403.p1 GENE.S_Transcript_5403~~S_Transcript_5403.p1 ORF type:complete len:175 (+),score=28.97,zf-HIT|PF04438.12|4.7e-10 S_Transcript_5403:392-916(+)
MGPQQCKVCNEVKSKYKCPACLIPYCSLGCFKKHKETPCATPKPVVSDEATKNSCPVPVSGDEKPSIPESVPERPIYVDEPSEVLERAQLESIAASSEIRDALKNEDLQKLIRSIDNSPNAKERLNVRNLKRLWVWMCSEYSLTRFCPLQILRECQLQTSTIPALSDWLLGSNS*

Click here to download the sequence:
Link to NCBI Protein BLAST