Transcript Information: S_Transcript_54030.p4


Annotated TAIR IDAT1G73380.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1308 (InterPro:IPR010733); Has 162 Blast hits to 160 proteins in 67 species: Archae - 0; Bacteria - 2; Metazoa - 120; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:27589100-27590657 | Forward length=434
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.23694878130148
Replicate 20.24857609599696
Replicate 30.23684275116646
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.28024493783462


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54030.p4 GENE.S_Transcript_54030~~S_Transcript_54030.p4 ORF type:5prime_partial len:90 (-),score=4.98 S_Transcript_54030:804-1073(-)
GAGATTACAAACTCCATGTTAATCTTAAACCGCTGCCTCAATTCATTCTCAGGTGTTGCCAATATCTTTTCTGCACCACCGTTACTTATTCCAGATACAATAGCAATCAAAGCTGTTGTGTCGAAATTGACCAGATCCTCATCCCTCAATCCAAGGTCCCCTCTACTCCCAGATTGCATATCATTCAAATGCAAAGGCCATTCTCTCATTCCCACTATCAGAGAATTGAATGACAGCCCTAGACCCAGCCCATCATATTTCTCCGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54030.p4 GENE.S_Transcript_54030~~S_Transcript_54030.p4 ORF type:5prime_partial len:90 (-),score=4.98 S_Transcript_54030:804-1073(-)
EITNSMLILNRCLNSFSGVANIFSAPPLLIPDTIAIKAVVSKLTRSSSLNPRSPLLPDCISFKCKGHSLIPTIRELNDSPRPSPSYFSV*

Click here to download the sequence:
Link to NCBI Protein BLAST