Transcript Information: S_Transcript_54034.p1


Annotated TAIR IDAT2G20710.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:8926110-8927722 | Forward length=490
E-Value1.7E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9677639133435
Replicate 23.8777024070784
Replicate 33.0551603209197
Condition 2: 8 Hour
Replicate 17.1515450356446
Replicate 26.6889567650092
Replicate 35.8134129831767
Condition 3: 24 Hour
Replicate 14.3248456203601
Replicate 23.067627021445
Replicate 34.3820117552323


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54034.p1 GENE.S_Transcript_54034~~S_Transcript_54034.p1 ORF type:complete len:495 (+),score=88.98,PPR|PF01535.16|0.00057,PPR|PF01535.16|0.0025,PPR|PF01535.16|95,PPR|PF01535.16|9.4,PPR|PF01535.16|14,PPR|PF01535.16|2e+03,PPR|PF01535.16|0.0022,PPR|PF01535.16|1.1e+03,PPR_2|PF13041.2|8.6e+02,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|5.7e-08,PPR_2|PF13041.2|5.5e+02,PPR_2|PF13041.2|2.5e+03,PPR_2|PF13041.2|1e+03,PPR_2|PF13041.2|0.00021,PPR_2|PF13041.2|1.2e+04,PPR_3|PF13812.2|5.6,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|8.9,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|14,PPR_1|PF12854.3|43,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|50,PPR_1|PF12854.3|61,PPR_1|PF12854.3|0.0036,TPR_19|PF14559.2|5.3e+03,TPR_19|PF14559.2|29,TPR_19|PF14559.2|16,TPR_19|PF14559.2|15,TPR_19|PF14559.2|1.5,TPR_19|PF14559.2|1.8e+02 S_Transcript_54034:61-1545(+)
ATGAGGCTAGCACTGTTGTTCTTGGCTAGAACTAGAAGGTGGCCATTATCAACCCTTGCATCTCAAACTCAAGGCTTTTCTGGGAAAACATGGTACTCAACAAAAACACCCTCTTGGAAAAGAAACGAGCATAAAAAAGAAGAGTCACTGTATAGAAGAATATCACCAGTGGGTGACGTTAATAAATCAGTGGTACCAGTGCTTGATCAGTGGATTCAAGAGGGTCGTAATGTCAGTCAACGCCAGTTGCATTCCATCATCAAGGAGCTCCGCCATTATAGGCGCCTTAAACACGCCCTTGAGATATCCCAATGGATGACCGACAAAAGATACATGAGTATGTCACCCTCAGATGTTGCTATCCGCCTGGACTTGATCGGGAAGGTCCATGGAATCGAGCAAGCAGAGAGTTTCTTCAATAATACTGCAAAGCAGTTCAGAACATTGGAAGTTTATGGTGCGCTTCTTGGTTGCTATTCGCAACAAAAATGTGTGGATAAAGCAGAGGCTGTCATGCAGCAGATGAGGGAGTTGGGATTTAATTTATCAGCCTTAAATTACAATGTTCTGCTAAGTCTATATTTCCAAACAGGGAACCGTGAGAAGGCCGAAACACTGATGCAAGAAATGGAAGTGAAACAGATCAAATTTGATGGATGTACGTATGCCATTCTGTTGAATGCGTATGGAGGTGATTCTGAAATTGATGCAATGGAGAAAATTCTGACAAAAATAGAATCTGATCAAGAGATTGATATCAACTGGAATATCTATGCTATTGCTGCAAATCATTATCTGAGAGCTGGGCTTATAGACAAGGCTTTGGGATTGCTCAAAAAATCTGAAAATTTGGCAACATTTGCACAAAAAAAGAGAGAAAGCTTTTCCTCTATTCTCACACTCTACGCAGTAGCAGGAAAGAAAGAAGATGTGCTGAGAATTTGGAACAAATGCATGATGTACAAGGCATCCAACCTGAGCTATAAAAAAATATTGTCCTCAATTTTGAAATTTGATGATACGGAAACTGCAGAAAAGATTTTAAATGATTGGGAAGGCAGTGATCTGGCCAAAGACATCAAAGTGCCAAACTTCTTGATAAGCTACTACTGCAAAAATGGTCAATTGGAGAAGGCTGAGGCTCTCATAGATAAGGTGAGCACGAAGAAATGGCAAAAGCCAAACTTACATACATGGTTTTGGATGTCGTTAGGTTATCTTCGAAGCAATCAAATGCCAAAGGCAGTAGAAGCATTGAAGGCTGCTGTCTTGGAACGATATCCTAGAGGAAGCTGGAAGCCGGACAAAGAAACTCTAGCGGCCTGTCTAAAGCACTTGAAAGAGGAGGGAGATAGTGTGCGATCTTGTGAATTCATAACTTTACTTCATAACAAGGGTATCATCACTGTCGAAATTCGAGCCAGATTGCTTGAATATGTTTATGGTGAATATGCTGGTGAAGACCCTTTCGAAGGAATCAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54034.p1 GENE.S_Transcript_54034~~S_Transcript_54034.p1 ORF type:complete len:495 (+),score=88.98,PPR|PF01535.16|0.00057,PPR|PF01535.16|0.0025,PPR|PF01535.16|95,PPR|PF01535.16|9.4,PPR|PF01535.16|14,PPR|PF01535.16|2e+03,PPR|PF01535.16|0.0022,PPR|PF01535.16|1.1e+03,PPR_2|PF13041.2|8.6e+02,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|5.7e-08,PPR_2|PF13041.2|5.5e+02,PPR_2|PF13041.2|2.5e+03,PPR_2|PF13041.2|1e+03,PPR_2|PF13041.2|0.00021,PPR_2|PF13041.2|1.2e+04,PPR_3|PF13812.2|5.6,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|8.9,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|14,PPR_1|PF12854.3|43,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|50,PPR_1|PF12854.3|61,PPR_1|PF12854.3|0.0036,TPR_19|PF14559.2|5.3e+03,TPR_19|PF14559.2|29,TPR_19|PF14559.2|16,TPR_19|PF14559.2|15,TPR_19|PF14559.2|1.5,TPR_19|PF14559.2|1.8e+02 S_Transcript_54034:61-1545(+)
MRLALLFLARTRRWPLSTLASQTQGFSGKTWYSTKTPSWKRNEHKKEESLYRRISPVGDVNKSVVPVLDQWIQEGRNVSQRQLHSIIKELRHYRRLKHALEISQWMTDKRYMSMSPSDVAIRLDLIGKVHGIEQAESFFNNTAKQFRTLEVYGALLGCYSQQKCVDKAEAVMQQMRELGFNLSALNYNVLLSLYFQTGNREKAETLMQEMEVKQIKFDGCTYAILLNAYGGDSEIDAMEKILTKIESDQEIDINWNIYAIAANHYLRAGLIDKALGLLKKSENLATFAQKKRESFSSILTLYAVAGKKEDVLRIWNKCMMYKASNLSYKKILSSILKFDDTETAEKILNDWEGSDLAKDIKVPNFLISYYCKNGQLEKAEALIDKVSTKKWQKPNLHTWFWMSLGYLRSNQMPKAVEALKAAVLERYPRGSWKPDKETLAACLKHLKEEGDSVRSCEFITLLHNKGIITVEIRARLLEYVYGEYAGEDPFEGIS*

Click here to download the sequence:
Link to NCBI Protein BLAST