Transcript Information: S_Transcript_54036.p1


Annotated TAIR IDAT2G20710.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:8926110-8927722 | Forward length=490
E-Value1E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.71157757313317
Replicate 20.58991415929184
Replicate 30.88761831418398
Condition 2: 8 Hour
Replicate 11.8246323265996
Replicate 20.83744887956196
Replicate 31.3678618783945
Condition 3: 24 Hour
Replicate 10.87613169079923
Replicate 20.90897640012088
Replicate 31.0115793210608


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54036.p1 GENE.S_Transcript_54036~~S_Transcript_54036.p1 ORF type:5prime_partial len:374 (+),score=58.53,PPR|PF01535.16|0.0004,PPR|PF01535.16|0.0017,PPR|PF01535.16|66,PPR|PF01535.16|6.7,PPR|PF01535.16|5.8,PPR_2|PF13041.2|5.7e+02,PPR_2|PF13041.2|1.5e+04,PPR_2|PF13041.2|0.0075,PPR_2|PF13041.2|3.9e-08,PPR_2|PF13041.2|4e+02,PPR_2|PF13041.2|9.4e+02,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|0.0083,PPR_3|PF13812.2|89,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|20 S_Transcript_54036:2-1123(+)
AAACATTCAAAATTTCCGATTTTCACCACTCTTGTAAGTTGTACATCAAGACTGAAGAGTAAGTTCCATTTTTTTTTCCTCCACTATCTTTTCCCGTGCTTTGACATGAAGCTAGCACTGTTGTTCTTGGCTAGAACTAGAAGGTTGCCATTATCAACCCTTGCTTCTCAAACTCAAGGCTTTTATGGGAAAACATGGTACTCAACAAAAACACCCTCTTGGAAAAGAAACGAGCATAAAAAAGAAGAGTCACTGTATAGAAGAATATCACCAGTGGGTGACGTTAATAAATCAGTGGTACCAGTGCTTGATCAGTGGATTCAAGAGGGTCGTAATGTCAGTCAACGCCAGTTGCATTCCATCATCAAGGAGCTCCGCCATTATAGGCGCCTTAAACACGCCCTTGAGATATCCCAATGGATGACCGACAAAAGATACATGAGTATGTCACCCTCAGATGTTGCTATCCGCCTGGACTTGATCGGGAAGGTCCATGGAATCGAGCAAGCAGAGAGTTTCTTCAATAATACTGCAAAGCAGTTCAGAACATTGGAAGTTTATGGTGCGCTTCTTGGTTGCTATTCGCAACAAAAATGTGTGGATAAAGCAGAGGCTGTCATGCAGCAGATGAGGGAGTTGGGATTTAATTTATCAGCCTTAAATTACAATGTTCTGCTAAGTCTATATTTCCAAACAGGGAACCGTGAGAAGGCCGAAACACTGATGCAAGAAATGGAAGTGAAACAGATCAAATTTGATGGATGTACGTATGCCATTCTGTTGAATGCGTATGGAGGTGATTCTGAAATTGATGCAATGGAGAAAATTCTGACAAAAATAGAATCTGATCAAGAGATTGATATCAACTGGAATATCTATGCTATTGCTGCAAATCATTATCTGAGAGCTGGGCTTATAGACAAGGCTTTGGGATTGCTCAAAAAATCTGAAAATTTGGCAACATTTGCACAAAAAAAGAGAGAAAGCTTTTCCTCTATTCTCACACTCTACGCAGTAGCAGGAAAGAAAGAAGATGTGCTGAGAATTTGGAACAAATGCAAAATGTACAAGGCATCCAACCTGCTCTATAAAAAAAATGTTGTCCTCAATTCTGAAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54036.p1 GENE.S_Transcript_54036~~S_Transcript_54036.p1 ORF type:5prime_partial len:374 (+),score=58.53,PPR|PF01535.16|0.0004,PPR|PF01535.16|0.0017,PPR|PF01535.16|66,PPR|PF01535.16|6.7,PPR|PF01535.16|5.8,PPR_2|PF13041.2|5.7e+02,PPR_2|PF13041.2|1.5e+04,PPR_2|PF13041.2|0.0075,PPR_2|PF13041.2|3.9e-08,PPR_2|PF13041.2|4e+02,PPR_2|PF13041.2|9.4e+02,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|0.0083,PPR_3|PF13812.2|89,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|20 S_Transcript_54036:2-1123(+)
KHSKFPIFTTLVSCTSRLKSKFHFFFLHYLFPCFDMKLALLFLARTRRLPLSTLASQTQGFYGKTWYSTKTPSWKRNEHKKEESLYRRISPVGDVNKSVVPVLDQWIQEGRNVSQRQLHSIIKELRHYRRLKHALEISQWMTDKRYMSMSPSDVAIRLDLIGKVHGIEQAESFFNNTAKQFRTLEVYGALLGCYSQQKCVDKAEAVMQQMRELGFNLSALNYNVLLSLYFQTGNREKAETLMQEMEVKQIKFDGCTYAILLNAYGGDSEIDAMEKILTKIESDQEIDINWNIYAIAANHYLRAGLIDKALGLLKKSENLATFAQKKRESFSSILTLYAVAGKKEDVLRIWNKCKMYKASNLLYKKNVVLNSEI*

Click here to download the sequence:
Link to NCBI Protein BLAST