Transcript Information: S_Transcript_54099.p2


Annotated TAIR IDAT3G26420.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
Annotated Gene Symbol(s)ATRZ-1A
Annotation TypeHomolog
Chromosome Positionchr3:9671953-9673055 | Forward length=245
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.38370068795678
Replicate 30.80185809059133
Condition 2: 8 Hour
Replicate 11.1126290600243
Replicate 20.38907562851699
Replicate 30.37071039313011
Condition 3: 24 Hour
Replicate 10.18995550861386
Replicate 20.19707662240302
Replicate 30.43864425052376


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54099.p2 GENE.S_Transcript_54099~~S_Transcript_54099.p2 ORF type:complete len:115 (+),score=18.41,zf-CCHC|PF00098.19|2.9e-06 S_Transcript_54099:2345-2689(+)
ATGAATAGACCAAAGTCCAATTATATTTCTAATTCTTCTAACTCTGTTGAAAAGTGTTATAAATGTGGTAGCCCAGAACATAAGATAAAAGATTGTCCACAATGGCGGAACAAAGACAAAGGCAAGGAACGCGGAAAGTTCCCTTCAAAGGACGAACAGGCAAGCGACAAGAAAGCCTTCCAAAGAGCCTTCATATTAGCATGGGGAGACACGGATTCTGATGGTGATGATAATGAAGAGTGCAACGAAATGGCTAATCTCTGTCTCATGGCCAAAGGAGCATCAGATATAGAATCTGACACTATAGATATTGGGGATTATTATGATTTGAGTAGGATGCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54099.p2 GENE.S_Transcript_54099~~S_Transcript_54099.p2 ORF type:complete len:115 (+),score=18.41,zf-CCHC|PF00098.19|2.9e-06 S_Transcript_54099:2345-2689(+)
MNRPKSNYISNSSNSVEKCYKCGSPEHKIKDCPQWRNKDKGKERGKFPSKDEQASDKKAFQRAFILAWGDTDSDGDDNEECNEMANLCLMAKGASDIESDTIDIGDYYDLSRML*

Click here to download the sequence:
Link to NCBI Protein BLAST