Transcript Information: S_Transcript_54153.p1


Annotated TAIR IDAT1G20970.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; BEST Arabidopsis thaliana protein match is: proton pump interactor 1 (TAIR:AT4G27500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7314338-7319246 | Forward length=1364
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.102368028636
Replicate 228.213476939802
Replicate 327.518394020903
Condition 2: 8 Hour
Replicate 17.3411332355819
Replicate 26.4135999486349
Replicate 34.6432941171122
Condition 3: 24 Hour
Replicate 150.445408150966
Replicate 242.590571416048
Replicate 349.960144391624


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54153.p1 GENE.S_Transcript_54153~~S_Transcript_54153.p1 ORF type:complete len:886 (+),score=192.59,CH|PF00307.27|1.5e-05 S_Transcript_54153:250-2907(+)
ATGGCCGTGACTACGGAATCGAGTGAGTTTAATTCACTGTCACCGTCGCCGTCGCCGTCATCGGGAACTAACTTCCGTGAGCTTGACGATGCTTTCTTGCAGTCTCAAACAAGAATATGGCTTGGAGAAGTTTTGCAGATAAGATTTGATGAGGAGACGAACATTGGTGATTTACTTGCTGATGGAGAGTTGCTGCTTGAAGTGTCCGAGGTATTATCAAGAACGTTTCCGACCCTTGGTGTGGATGCGACTCAAATGAAAGTGAATGAAGGGAAATCTGCTGCCGCAAACAAAAGCACCAGGAGATACATGCCCTATTACAATGTTGGTTCATTTTTAAGGATGTGCAAAAAGTTGGGCTTGGATGGCATTGATCTCTTTGATCCATCTGATGTTGTGGACAAGAGGAATACAAGAAAAGTTTGCATGTGCATACGTTCTCTTTCAAAGAAAGTGATGTCAAGAGAGCTAAATGTAACCGCACCTGACTTTGATAGCGTTACTTGCACTTTATCCATGCCTACTGATATGGTTCAATGCATTCGGAAGAGCCTAGAGCTTTCACAGTCCAGCGCTTCCCCTTCTGCTGGACCTGACGCTGGAAAGGTTTCAAGGGTCAGATATTGGCGGAGGATGTCTGATTCTACCTCTGCCCAAAGTAATGGAGACTCCTTTGACTATTGTGATGAGGCTGAAAGCTGTTTTGTGGTTCCCGAATCTAATGGACCTTCAGACTATGTTTATGACGCTGCATGTTCAAGTAATCCTGATTCACAGATGGTCAGAGACAACTGTTCTGAAAACCTAAAACTTCATCTGAACACTGAAGACAGAGAAAATGAGGAAGATGAGCAGTGTGAATACCTGTCACCGTCTATTGCCGAGTCTGTGGGTTCGTTTTGCTCACAGTATTACAGTGACCAGGAGCTGAGCAGCATGCCATCCTCACCAGGTCTTGGTTCATGTGTCAATGGTAAAGTTCTGGAGGTAGAGACAGAACATGGATATCAAAATGGTGATGTGACCCATGTCCCTATTGACTGGGAACATAGTTCTCTGAATGGTGGTAACCATATAGATGGAAATGCAAAGAATGGTGTAGCTGCTAATGTATCCCATGAAAATGCAAATAATGGTGAAACTGATAATGTATCCCATGATAAAGAAGATGCAGACTCAACTTGCTTTGATGGTGGTTATCCAACCAAGGAAAGCAAGAGTTGCAATGCGCATATTGAAAATTCAGCAAATCATTCCGAAATTGAATGTGAGAAGAGCTCATCTGATGACATTCAGATGAGTGAATGTGTTGTAGAAGATGACTTTTGTGCTGGCAAGAGTCCAGATCTGAGTCTTGAGGAGGAGCAATTGGACAATAATGCAGCGAAACATGAAATGGCAAACAACGATTTAAGCCCTGAAATAGGTGTATCCTCTTCAGATGGGAAATTCAAGGACGGTGATATTTCTAACGAGCTCTTGATACAAAGCCCTTATCATGTTTCCAGTCATACAAAAACTCCATATTGCTCTTCATATGGTGATGCGAATCAGAAATCTCAAATATTTACAGAAGTAAATACTGGAGGAAATTTTTGTTGTGATAGTTTAAACAGTGCAAATACTACAGAAGATTTATCAGGTCAGGTGGTACCACTCGCACAGCAGTTCTCTTGTTCCGTTGGCTCTGAGGCACACAGTTACAATTCTTCAAGTCTTGATCCAAGAGCTGTTGCTCAAAGCTCGGCATCTGCTCCTTTGATCCATGACAGAGGTAACAGTACTTTTACAGACATTCAAAATGACAAACAGGCACTTGACGCCAACATGATTGCCTCTAATCTTTCGGGTCACCCTGACAATCATTGTGTGGGTGACAATCCAAGTGATTTTAGTGAAAAACCTGGAACGGGTTTTAATTCCTCAGCCTATATAGTTGGGGCTGAGGCAAGCAAATCATGCTCAGATGATAGTCAAGATACTCGGGAAGTATCTGCGGATAACAATGATCACGCTGAGATTATTAATGGCAAGCATACCAACACAGAAGCGGCAAGTTTTTGCCCAAAGGATGATTTTATGGGTGGTGACGGACTTGATTCCTTGGACATGCCTGACAAGAAATTGAATTCTTCACCATCTATAACCAAGACTAAGGACTGTATAAACGGCTTAGATGACAGTCAAGATACCTTGAAGGTATCCGGGGCTTATAATGTGACGGCTGAGAGTACTACTGGAAAGCCTATTGATGTAGAAAATGGAACTGCAATGGATAGCTCTGCTACCATCCTTTCTGCTTCTCTACCAGGAGCTGAAAATCCTGAAAGTATTGAAGATGCAGCTCATAAGCTTCACCAACGTGCAGAAAACTTGGTTAAGGGTGAAAAAGAACATAACAATACCAATAAAGAAACGTCACAAAGCCAGCCTCGAAGGAAATTGATAAAATCAGTCGTCAAGGGAACAACACTAGTTGGCATTGCTGTTGTCTTGATTCACCTCAGGAAGTATGCTAAAATAAATCTTCCCAGAGCAAAGAAGCAGCCCGTTGAGACCCTTATAAGTAATAGATCCAAATCATCACGTCAAATGGGTCAGAAGGTTTCTAGTACTAGCAGTGTATATCCAGCTGAGAAGCTTAAGCTTGGTATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54153.p1 GENE.S_Transcript_54153~~S_Transcript_54153.p1 ORF type:complete len:886 (+),score=192.59,CH|PF00307.27|1.5e-05 S_Transcript_54153:250-2907(+)
MAVTTESSEFNSLSPSPSPSSGTNFRELDDAFLQSQTRIWLGEVLQIRFDEETNIGDLLADGELLLEVSEVLSRTFPTLGVDATQMKVNEGKSAAANKSTRRYMPYYNVGSFLRMCKKLGLDGIDLFDPSDVVDKRNTRKVCMCIRSLSKKVMSRELNVTAPDFDSVTCTLSMPTDMVQCIRKSLELSQSSASPSAGPDAGKVSRVRYWRRMSDSTSAQSNGDSFDYCDEAESCFVVPESNGPSDYVYDAACSSNPDSQMVRDNCSENLKLHLNTEDRENEEDEQCEYLSPSIAESVGSFCSQYYSDQELSSMPSSPGLGSCVNGKVLEVETEHGYQNGDVTHVPIDWEHSSLNGGNHIDGNAKNGVAANVSHENANNGETDNVSHDKEDADSTCFDGGYPTKESKSCNAHIENSANHSEIECEKSSSDDIQMSECVVEDDFCAGKSPDLSLEEEQLDNNAAKHEMANNDLSPEIGVSSSDGKFKDGDISNELLIQSPYHVSSHTKTPYCSSYGDANQKSQIFTEVNTGGNFCCDSLNSANTTEDLSGQVVPLAQQFSCSVGSEAHSYNSSSLDPRAVAQSSASAPLIHDRGNSTFTDIQNDKQALDANMIASNLSGHPDNHCVGDNPSDFSEKPGTGFNSSAYIVGAEASKSCSDDSQDTREVSADNNDHAEIINGKHTNTEAASFCPKDDFMGGDGLDSLDMPDKKLNSSPSITKTKDCINGLDDSQDTLKVSGAYNVTAESTTGKPIDVENGTAMDSSATILSASLPGAENPESIEDAAHKLHQRAENLVKGEKEHNNTNKETSQSQPRRKLIKSVVKGTTLVGIAVVLIHLRKYAKINLPRAKKQPVETLISNRSKSSRQMGQKVSSTSSVYPAEKLKLGI*

Click here to download the sequence:
Link to NCBI Protein BLAST