Transcript Information: S_Transcript_54194.p2


Annotated TAIR IDAT1G27520.1
Annotated Gene NameGlycosyl hydrolase family 47 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9558752-9562091 | Forward length=574
E-Value1.4E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0441325406402
Replicate 23.5689806637156
Replicate 33.164194916304
Condition 2: 8 Hour
Replicate 16.1676373956414
Replicate 25.1542984611135
Replicate 34.5975357579372
Condition 3: 24 Hour
Replicate 14.0691449639342
Replicate 23.3329134671099
Replicate 33.8327616497971


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54194.p2 GENE.S_Transcript_54194~~S_Transcript_54194.p2 ORF type:complete len:204 (+),score=24.81,Glyco_hydro_47|PF01532.16|1.7e-40 S_Transcript_54194:287-898(+)
ATGCCATCCAGAAATTCAACAACATGGGGTCTCTTGATTTTCCTAATTATAGCTACCCTTTTCAGCTTTTCTCTTTCTGATCCCGATTCCCATAAGAAGATGCTCATGAGGAACAAAGTCCGCCAAATGTTCTACCATGCATATGACAATTACATGAGATATGCATTTCCGCATGATGAGTTGAAGCCTCTTTCAAGAAGTTTTACGGACTCGATTAGTGAACTGGGAAATCTGAGGTTAGAACACTTGCCCCAGCACTACAATGGCTCTGCACTTTCACTTATAGAGTCATTATCAAGTCTGCTCATAATGGGTAACAATACAGAATTTGAAAGAGCAGTTTTATGGCTCTCTGAAAATCTAACATTTGACGTGGATGCAAGGGTGAATCTGTTTGAGTGCAACATAAGAGTACTTGGGGGACTTGTTTCTGCTCATATGCTTGCGACTGATTCTAGAAACAGGTTCACTCAAGGAACTTACAAGAATCAGCTGCTTAGTCTGGCGGAAGACCTTGGGCGAAGATTCTTGCCTGCATTTGACACACCAACTGGATTACCATATGCATGGGTCAATCTAAAGGTAAGGGCTTATGTCTGGGATGGCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54194.p2 GENE.S_Transcript_54194~~S_Transcript_54194.p2 ORF type:complete len:204 (+),score=24.81,Glyco_hydro_47|PF01532.16|1.7e-40 S_Transcript_54194:287-898(+)
MPSRNSTTWGLLIFLIIATLFSFSLSDPDSHKKMLMRNKVRQMFYHAYDNYMRYAFPHDELKPLSRSFTDSISELGNLRLEHLPQHYNGSALSLIESLSSLLIMGNNTEFERAVLWLSENLTFDVDARVNLFECNIRVLGGLVSAHMLATDSRNRFTQGTYKNQLLSLAEDLGRRFLPAFDTPTGLPYAWVNLKVRAYVWDGS*

Click here to download the sequence:
Link to NCBI Protein BLAST