Transcript Information: S_Transcript_54196.p1


Annotated TAIR IDAT1G27520.1
Annotated Gene NameGlycosyl hydrolase family 47 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9558752-9562091 | Forward length=574
E-Value3.5E-267
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1957434379789
Replicate 25.1181696496037
Replicate 37.0198702660552
Condition 2: 8 Hour
Replicate 18.50133803183
Replicate 28.5154108561122
Replicate 39.697750486951
Condition 3: 24 Hour
Replicate 15.0676193683135
Replicate 27.2993807554452
Replicate 35.2261893812403


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54196.p1 GENE.S_Transcript_54196~~S_Transcript_54196.p1 ORF type:3prime_partial len:444 (+),score=65.32,Glyco_hydro_47|PF01532.16|2.3e-99 S_Transcript_54196:272-1600(+)
ATGCCATCCAGAAATTCAACAACATGGGGTCTCTTGATTTTCCTAATTATAGCTACCCTTTTCAGCTTTTCTCTATCTGATCTCGATTCCCAAAAGAAGATGCTCATGAGGGACAAAGTCCGACAAATGTTCTACCATGCATATGACAATTACATGAGATATGCATTTCCGCATGATGAGTTGAAGCCTCTTTCAAGAAGTTTTACGGACTCGATTAGTGAACTGGGAAATCTGAGGTTAGAACACTTACCCCAGAACTACAATGGCTCTGCACTTTCACTTATAGAGTCATTATCAAGTCTGCTCATAATGGGTAACAATACAGAATTTGAAAGAGCAGTTTTATGGCTCTCTGAAAATCTAACATTTGACGTGGATGCAAGGGTGAATCTGTTTGAGTGCAACATAAGAGTACTTGGGGGACTTGTTTCTGCTCATATGCTTGCGACTGATTCTAGAAACAGGTTCACTCAAGGAACTTACAAGAATCAGCTGCTTAGTCTGGCGGAAGACCTTGGGCGAAGATTCTTGCCTGCATTTGACACACCAACTGGATTACCATATGCATGGGTCAATCTAAAGTATGGAGTCATGGACAAAGAGACAACAGAAACAAGCACATCTGGTTGTGGATCCTTGATTCTTGAAATGGGAGCATTATCAAGATTGACTGGCAACACACAATATGAAGCTGCAGCTTTGCGTGCTCTGCGGATATTATGGAGCATGAGGAGTTCACTGAATCTACTAGGAACTACACTGGATGTGGTCACTGGGAAATGGATAGAATATTCTGGTGGTATTGGCGCTGGGGTTGATTCATTCTATGAATATTTAGTCAAAGCCTATATTCTTTTCGGAAACGAGGAGTACTGGAGGATGTTTCACTCTGCTTATGTTGCTGTCCAGAAATATTTCAGACATGGTCCATGGTATCATGAAGCTGATATGAGGACAGGACATGCAACTTACTGGCAGCTGACAAGCCTCCAAGCATTTTGGCCAGGGCTACAGGTTCTTGTTGGAGATATTGAAGCTGCAAATTCCTCCCATCGTGAATTTTTCAAGGTTTGGCAGAAATTTGGAGTTCTGCCAGAAAGGTATTTGCTTGACCATCAAATGCTGCATCCTACAGAAAAATATTATCCTTTGCGTCCTGAATTAGTCGAATCTACATTCTACCTATATCAGGCAACAAAAGATCCATGGTACTTGGAAGTGGGTAAATCAATAATGAGGTCACTGAATTCGTATACGAAAGTTAAAGGCGGTTTTGCAAGCATTCGAGATGTGACAACTATGGTTTTGGAAGACCACCAGCACAGTTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54196.p1 GENE.S_Transcript_54196~~S_Transcript_54196.p1 ORF type:3prime_partial len:444 (+),score=65.32,Glyco_hydro_47|PF01532.16|2.3e-99 S_Transcript_54196:272-1600(+)
MPSRNSTTWGLLIFLIIATLFSFSLSDLDSQKKMLMRDKVRQMFYHAYDNYMRYAFPHDELKPLSRSFTDSISELGNLRLEHLPQNYNGSALSLIESLSSLLIMGNNTEFERAVLWLSENLTFDVDARVNLFECNIRVLGGLVSAHMLATDSRNRFTQGTYKNQLLSLAEDLGRRFLPAFDTPTGLPYAWVNLKYGVMDKETTETSTSGCGSLILEMGALSRLTGNTQYEAAALRALRILWSMRSSLNLLGTTLDVVTGKWIEYSGGIGAGVDSFYEYLVKAYILFGNEEYWRMFHSAYVAVQKYFRHGPWYHEADMRTGHATYWQLTSLQAFWPGLQVLVGDIEAANSSHREFFKVWQKFGVLPERYLLDHQMLHPTEKYYPLRPELVESTFYLYQATKDPWYLEVGKSIMRSLNSYTKVKGGFASIRDVTTMVLEDHQHSF

Click here to download the sequence:
Link to NCBI Protein BLAST