Transcript Information: S_Transcript_54197.p2


Annotated TAIR IDAT1G27520.1
Annotated Gene NameGlycosyl hydrolase family 47 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9558752-9562091 | Forward length=574
E-Value6.3E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8905410713516
Replicate 21.9289870651379
Replicate 32.3179395077749
Condition 2: 8 Hour
Replicate 11.8645150004051
Replicate 22.5672613193129
Replicate 32.3296008311455
Condition 3: 24 Hour
Replicate 11.9099351685765
Replicate 21.8576894734711
Replicate 31.1026030341034


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54197.p2 GENE.S_Transcript_54197~~S_Transcript_54197.p2 ORF type:complete len:183 (+),score=13.83,Glyco_hydro_47|PF01532.16|3e-19 S_Transcript_54197:272-820(+)
ATGCCATCCAGAAATTCAACAACATGGGGTCTCTTGATTTTCCTAATTATAGCTACCCTTTTCAGCTTTTCTCTATCTGATCTCGATTCCCAAAAGAAGATGCTCATGAGGGACAAAGTCCGACAAATGTTCTACCATGCATATGACAATTACATGAGATATGCATTTCCGCATGATGAGTTGAAGCCTCTTTCAAGAAGTTTTACGGACTCGATTAGTGAACTGGGAAATCTGAGGTTAGAACACTTACCCCAGAACTACAATGGCTCTGCACTTTCACTTATAGAGTCATTATCAAGTCTGCTCATAATGGGTAACAATACAGAATTTGAAAGAGCAGTTTTATGGCTCTCTGAAAATCTAACATTTGACGTGGATGCAAGGGTGAATCTGTTTGAGGTACGCAATTTTAGCTATGAAACTGCAATTCTAGGCTTCTGGCTGTCTTTGTTAATCGAGAGTGCTTCCATATTTCCATCAAGTTTGGTGAAGTTTTCTGCATTTTCAATCATTTATCATGTAACATTGATAATCCTAAGTCCTAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54197.p2 GENE.S_Transcript_54197~~S_Transcript_54197.p2 ORF type:complete len:183 (+),score=13.83,Glyco_hydro_47|PF01532.16|3e-19 S_Transcript_54197:272-820(+)
MPSRNSTTWGLLIFLIIATLFSFSLSDLDSQKKMLMRDKVRQMFYHAYDNYMRYAFPHDELKPLSRSFTDSISELGNLRLEHLPQNYNGSALSLIESLSSLLIMGNNTEFERAVLWLSENLTFDVDARVNLFEVRNFSYETAILGFWLSLLIESASIFPSSLVKFSAFSIIYHVTLIILSPN*

Click here to download the sequence:
Link to NCBI Protein BLAST