Transcript Information: S_Transcript_54201.p1


Annotated TAIR IDAT1G27520.1
Annotated Gene NameGlycosyl hydrolase family 47 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9558752-9562091 | Forward length=574
E-Value6.9E-220
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2202523964405
Replicate 27.8754314431024
Replicate 38.3258546099194
Condition 2: 8 Hour
Replicate 110.746653388161
Replicate 212.154783906623
Replicate 312.252416339871
Condition 3: 24 Hour
Replicate 17.2816278301981
Replicate 26.7218128822238
Replicate 37.1495558943636


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54201.p1 GENE.S_Transcript_54201~~S_Transcript_54201.p1 ORF type:complete len:381 (+),score=61.82,Glyco_hydro_47|PF01532.16|5.4e-70 S_Transcript_54201:1224-2366(+)
ATGGACAAAGAGACAACAGAAACAAGCACATCTGGTTGTGGATCCTTGATTCTTGAAATGGGAGCATTATCAAGATTGACTGGCAACACACAATATGAAGCTGCAGCTTTGCGTGCTCTGCGGATATTATGGAGCATGAGGAGTTCACTGAATCTACTAGGAACTACACTGGATGTGGTCACTGGGAAATGGATAGAATATTCTGGTGGTATTGGCGCTGGGGTTGATTCATTCTATGAATATTTAGTCAAAGCCTATATTCTTTTCGGAAACGAGGAGTACTGGAGGATGTTTCACTCTGCTTATGTTGCTGTCCAGAAATATTTCAGACATGGTCCATGGTATCATGAAGCTGATATGAGGACAGGACATGCAACTTACTGGCAGCTGACAAGCCTCCAAGCATTTTGGCCAGGGCTACAGGTTCTTGTTGGAGATATTGAAGCTGCAAATTCCTCCCATCGTGAATTTTTCAAGGTTTGGCAGAAATTTGGAGTTCTGCCAGAAAGGTATTTGCTTGACCATCAAATGCTGCATCCTACAGAAAAATATTATCCTTTGCGTCCTGAATTAGTCGAATCTACATTCTACCTATATCAGGCAACAAAAGATCCATGGTACTTGGAAGTGGGTAAATCAATAATGAGGTCACTGAATTCGTATACGAAAGTTAAAGGCGGTTTTGCAAGCATTCGAGATGTGACAACTATGGTTTTGGAAGACCACCAGCACAGTTTCTTCCTCTCTGAAACATGCAAATACCTTTACCTCCTTTATGATGACTCTTTTTTGGCTGGTCGGAATTACATCTTCACAACTGAAGGTCATCCTCTTCCAGTTCTTGGAACTTGGCATGAAAGGCTTCCAGAAACCTATACTTTGGGCAATTTTACTGTGTTGCAGGGAATGAACCAATTGAGACGTGCCAGTGCAATGATGCTGCAGATATGTCCTGCCATGACTTCGACTTTGAGCATCAATGGTGAAAAAGCTATACAAAAATTTGATAGTGCATGTCATGTCCCTGATGCTCGTAGCGATCACAGGTGTTTGACAGATGATGATTGCGGCGTTGACGCACTCACATGTAGGTGGAGGTCATGCAGCATGGCTGGCTATTGTGGCCTTTGGTTATATATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54201.p1 GENE.S_Transcript_54201~~S_Transcript_54201.p1 ORF type:complete len:381 (+),score=61.82,Glyco_hydro_47|PF01532.16|5.4e-70 S_Transcript_54201:1224-2366(+)
MDKETTETSTSGCGSLILEMGALSRLTGNTQYEAAALRALRILWSMRSSLNLLGTTLDVVTGKWIEYSGGIGAGVDSFYEYLVKAYILFGNEEYWRMFHSAYVAVQKYFRHGPWYHEADMRTGHATYWQLTSLQAFWPGLQVLVGDIEAANSSHREFFKVWQKFGVLPERYLLDHQMLHPTEKYYPLRPELVESTFYLYQATKDPWYLEVGKSIMRSLNSYTKVKGGFASIRDVTTMVLEDHQHSFFLSETCKYLYLLYDDSFLAGRNYIFTTEGHPLPVLGTWHERLPETYTLGNFTVLQGMNQLRRASAMMLQICPAMTSTLSINGEKAIQKFDSACHVPDARSDHRCLTDDDCGVDALTCRWRSCSMAGYCGLWLYI*

Click here to download the sequence:
Link to NCBI Protein BLAST