Transcript Information: S_Transcript_54207.p1


Annotated TAIR IDAT5G64090.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hyccin (InterPro:IPR018619); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25648069-25649415 | Forward length=448
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.7603714638623
Replicate 20.42024361061933
Replicate 30.1756451055581
Condition 2: 8 Hour
Replicate 10.6092968662038
Replicate 20.21306522514025
Replicate 30.40601614485679
Condition 3: 24 Hour
Replicate 10.20804650943423
Replicate 20.43169164907328
Replicate 30.24020994671539


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54207.p1 GENE.S_Transcript_54207~~S_Transcript_54207.p1 ORF type:internal len:105 (-),score=12.34 S_Transcript_54207:1-312(-)
GATCCCAACATAAATCCCAATAACAACAACAATTACTCTTCCTCGATTATGACCCACCGAAACCATAATCATTACCATAATAATAATAATAATAATGTTAATGGTGGTGGTGGTAATAATAATAGTGAAGATCCAATGCAGTCTTGGTGGGAATCTGTGTCCAAGGCTCGTTCCCGAATCCATTGTTTACTTTCCCTCCTTTCCCCTGATTCTTCTCATAGGCATAGTTCTGATGTTAATGGGGATGGATACAGAGACGATAGTTCATTTTTTATGTCGCTTGCGGATTCTGATAGGCCTGCTCGCTCCCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54207.p1 GENE.S_Transcript_54207~~S_Transcript_54207.p1 ORF type:internal len:105 (-),score=12.34 S_Transcript_54207:1-312(-)
DPNINPNNNNNYSSSIMTHRNHNHYHNNNNNNVNGGGGNNNSEDPMQSWWESVSKARSRIHCLLSLLSPDSSHRHSSDVNGDGYRDDSSFFMSLADSDRPARSL

Click here to download the sequence:
Link to NCBI Protein BLAST