Transcript Information: S_Transcript_54211.p1


Annotated TAIR IDAT5G28300.1
Annotated Gene NameDuplicated homeodomain-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:10292789-10295101 | Reverse length=619
E-Value2.5E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.107152293731
Replicate 212.146929082227
Replicate 311.984324758445
Condition 2: 8 Hour
Replicate 19.5445098984921
Replicate 28.5884437661872
Replicate 38.7019752394868
Condition 3: 24 Hour
Replicate 19.1224887985066
Replicate 210.398190704504
Replicate 310.438336729458


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54211.p1 GENE.S_Transcript_54211~~S_Transcript_54211.p1 ORF type:5prime_partial len:534 (+),score=131.84,Myb_DNA-bind_4|PF13837.2|4.2e+03,Myb_DNA-bind_4|PF13837.2|3.7e+03,Myb_DNA-bind_4|PF13837.2|8.6e-20 S_Transcript_54211:2-1603(+)
AAAGAGAAATTTGAGGAGGAAAGCAGAAGCTTCAACAGCAGCTTTATTAGTAATAATACTAACAACAACAAGAATAATAATAATAATAATAATAATGTTAGCAATATTACTAACAACATCAGGCTCTTTGGTGAGCTTGAAGAGGTTTATAATGATCATCATCAACAAAGCCCTCCTCATTCTCCTCCTCCTCCTGAACCTGAACCCGAACCCGAACCTGATCCTGTATTAGAAGAAGAAGAAGAACAAGAGTTACAGGAAGACAAGAGAGAAGAGGAGGAGAGATTAGAAGACAAGAGAAATAACAAGGATGAGGTGATGAGGTCAGAAGACAGTGAGAAGACGGAGGAAAATACAAAGAAGGTACAGAGGAAAAGAAAAAGAAGCAGCCAAAACAAGTTTGAAATGTTCAAAGGGTTTTGTGAGATTATTGTCAACAAAATGATGGCACAACAAGAGAAGCTTCACTCCAAGATTCTTGAAGATATGGTTAAAAGAGATGAAGAGAAGATTGCTAAGGAAGAGGCTTGGAAGAAGCAAGAGATTGAGAGGCTTCATAAGGAGATGGAGGTTAGGGCTCATGAACAAGCCATTGCAGGCGATCGCCAAGCTAAGATCCTTGAGTTCTTGAACAAGTTCATGAATTCAAACTATTTGGAGGTTCAATCTCTTGGAGAGGCCATTGAGAATCTCATTAAGGTACCTAATAGTATATCGAATTCCTCAATTTTAACTACTTGTACTCCTACAACACAACATGAACTTCAAAACCCTAGTTGTATTTCCTTAGTGGTGACACAAAAGTGTTCATCATCATCACCAAATAATGAGAATCTTGCTCCCAAAAGTCCCACTACTAGAGTAGACAACTCAAAGTCAACTCTACCCATATCGTCGTCCTCCACAGACCAACCCAGCTCCCAGAACCCTACTAACCCTCTCAGCAGCAATAGTGCTGCTGAGAATAATGATACATTGTTTAAACTTGTTTCGGTATCTGGGTCTGATATTCATACCAGCACTAATGCAGCGGATCCCATCAGCATGGAGTTTAGATCGCCAGACAGTAGTACCAAGGCCGCCAACCATAGGGCGGGTGTAGAAAATAGTATTAGAATCAGTGGAAGTAGAAGAGGTGGTGGTGGTGGTGGTAAAGATGACATTGGAAGGAGATGGCCTAGAGATGAAGTGCTTGCATTGATCAACATAAGATGCAACTTGTTCAACAAGAATGGGGATCCTCAACATGATAAATTAGAAGGCTCAACAAAGGGTCCATTATGGGAGAGGATCTCACAAAAGATGATGGAGCTAGGATACAAGAGAAGTGCAAAGAGGTGTAAGGAAAAATGGGAGAACATAAACAAGTACTTTAGGAAAACCAAGGACTTGAACAAGAAGAGATCCATTGACTCAAGAACATGTCCATACTTTCATCAACTTAGCCACTTATACAACCAAACGACGACGTCCGGTGTACAAGGAGGAGGGTCTAGTACTTCAAACGATGGAACTACAACAACAACAACAATGCATAATATTACTTCTGATCAAGGTAATGAAGGTGTGGTCCAAGCACCATCCTTTGATTTTGAATTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54211.p1 GENE.S_Transcript_54211~~S_Transcript_54211.p1 ORF type:5prime_partial len:534 (+),score=131.84,Myb_DNA-bind_4|PF13837.2|4.2e+03,Myb_DNA-bind_4|PF13837.2|3.7e+03,Myb_DNA-bind_4|PF13837.2|8.6e-20 S_Transcript_54211:2-1603(+)
KEKFEEESRSFNSSFISNNTNNNKNNNNNNNNVSNITNNIRLFGELEEVYNDHHQQSPPHSPPPPEPEPEPEPDPVLEEEEEQELQEDKREEEERLEDKRNNKDEVMRSEDSEKTEENTKKVQRKRKRSSQNKFEMFKGFCEIIVNKMMAQQEKLHSKILEDMVKRDEEKIAKEEAWKKQEIERLHKEMEVRAHEQAIAGDRQAKILEFLNKFMNSNYLEVQSLGEAIENLIKVPNSISNSSILTTCTPTTQHELQNPSCISLVVTQKCSSSSPNNENLAPKSPTTRVDNSKSTLPISSSSTDQPSSQNPTNPLSSNSAAENNDTLFKLVSVSGSDIHTSTNAADPISMEFRSPDSSTKAANHRAGVENSIRISGSRRGGGGGGKDDIGRRWPRDEVLALINIRCNLFNKNGDPQHDKLEGSTKGPLWERISQKMMELGYKRSAKRCKEKWENINKYFRKTKDLNKKRSIDSRTCPYFHQLSHLYNQTTTSGVQGGGSSTSNDGTTTTTTMHNITSDQGNEGVVQAPSFDFEF*

Click here to download the sequence:
Link to NCBI Protein BLAST