Transcript Information: S_Transcript_54212.p1


Annotated TAIR IDAT5G28300.1
Annotated Gene NameDuplicated homeodomain-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10292789-10295101 | Reverse length=619
E-Value3E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7936268175703
Replicate 26.05262368392
Replicate 35.5817838412313
Condition 2: 8 Hour
Replicate 15.5106318341618
Replicate 24.4347735356626
Replicate 33.3577175873333
Condition 3: 24 Hour
Replicate 14.330313187516
Replicate 24.6932140786418
Replicate 34.91048652135


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54212.p1 GENE.S_Transcript_54212~~S_Transcript_54212.p1 ORF type:complete len:565 (+),score=130.02,Myb_DNA-bind_4|PF13837.2|4.5e+03,Myb_DNA-bind_4|PF13837.2|4e+03,Myb_DNA-bind_4|PF13837.2|1.1e-19 S_Transcript_54212:366-2060(+)
ATGGAGTACCAAGCATGTGGTGTAGGGGCAGGGGCAGCCTCATTTTCAAACTCGTCTTCATCAACAACCTCATCCTTTGATCCCAACATAAATCCCAATAACAACAACAATTACTCTTCCTCGATTATGACCCACCGAAACCATAATCATTACCATAATAATAATAATAATAATGTTAGCAATATTACTAACAACATCAGGCTCTTTGGTGAGCTTGAAGAGGTTTATAATGATCATCATCAACAAAGCCCTCCTCATTCTCCTCCTCCTCAACCTGAACATGAACCCGTACCCGAACCCGATCCTGTATTAGAAGAAGAAGAAGAACAAGAGTTACAGGAAGACAAGAGAGAAGAGGAGGAGAGATTAGAAGACAAGAGAAATAACAAGGATGAGGTGATGAGGTCAGAAGACAGTGAGAAGACGGAGGAAAATACAAAGAAGGTACAGAGGAAAAGAAAAAGAAGCAGCCAAAACAAGTTTGAAATGTTCAAAGGGTTTTGTGAGATTATTGTCAACAAAATGATGGCACAACAAGAGAAGCTTCACTCCAAGATTCTTGAAGATATGGTTAAAAGAGATGAAGAGAAGATTGCTAAGGAAGAGGCTTGGAAGAAGCAAGAGATTGAGAGGCTTCATAAGGAGATGGAGGTTAGGGCTCATGAACAAGCCATTGCAGGCGATCGCCAAGCTAAGATCCTTGAGTTCTTGAACAAGTTCATGAATTCAAACTATTTGGAGGTTCAATCTCTTGGAGAGGCCATTGAGAATCTCATTAAGGTACCTAATAGTATATCGAATTCCTCAATTTTAACTACTTGTACTCCTACAACACAACATGATCTTCAAAACCCTAGTTGTAGTTCCTTAGTGGTGACCCAAAAGTGTTCATCATCATCACCACATAATGAGAATCTTGCTACCCAAAGTCCTAGTAGATTAGACAACTCAAAGTCAACTCTACCCGTATCTTCGCCCTCCACAGACCAACCCAGGTCCCAGAACCCTACTAACCCTCTCAGCAGCAATAGTGCTGCTGGGAATGATGATACATTGTTTAAACTTCTTTCGGTATCTGGGTCTGATATTCATACCAGCACTGATGCAGCGGATCCCATCAACATGGAGTTCAAATCGCCAGACAGTAGTACCCAATCCGCCTACCATAGGGCGAGTGTAGAAAATAGTCTTAGTATCAGTGGAAGTGGAAGAGTTGCTGCTGCTGGTGGTGGTGGTGGTAAAGATGACATTGGAAGGAGATGGCCTAGAGATGAAGTGCTTGCATTGATCAACATAAGATGCAACTTGTTCAACAAGAATGGGGATCCTCAACATGATAAATTAGAAGGCTCAACAAAGGGTCCATTATGGGAGAGGATCTCACAAAAGATGATGGAGCTAGGATACAAGAGAAGTGCAAAGAGGTGTAAGGAAAAATGGGAGAACATAAACAAGTACTTTAGGAAAACCAAGGACTTGAACAAGAAGAGATCCATTGACTCAAGAACATGTCCATACTTTCATCAACTTAGCAACTTATACAGCCAAACCACGTCGTCCGGCGTACAAGGAGGAGGATCAACTCCTTCAAACGATGGAACTACTACTACTACTACAACAATAATGCATAATATTGCTTCTGATCAAGGTAATGAAGGTGTGGTCCAAGCACCATCCTTTGATTTTGAATTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54212.p1 GENE.S_Transcript_54212~~S_Transcript_54212.p1 ORF type:complete len:565 (+),score=130.02,Myb_DNA-bind_4|PF13837.2|4.5e+03,Myb_DNA-bind_4|PF13837.2|4e+03,Myb_DNA-bind_4|PF13837.2|1.1e-19 S_Transcript_54212:366-2060(+)
MEYQACGVGAGAASFSNSSSSTTSSFDPNINPNNNNNYSSSIMTHRNHNHYHNNNNNNVSNITNNIRLFGELEEVYNDHHQQSPPHSPPPQPEHEPVPEPDPVLEEEEEQELQEDKREEEERLEDKRNNKDEVMRSEDSEKTEENTKKVQRKRKRSSQNKFEMFKGFCEIIVNKMMAQQEKLHSKILEDMVKRDEEKIAKEEAWKKQEIERLHKEMEVRAHEQAIAGDRQAKILEFLNKFMNSNYLEVQSLGEAIENLIKVPNSISNSSILTTCTPTTQHDLQNPSCSSLVVTQKCSSSSPHNENLATQSPSRLDNSKSTLPVSSPSTDQPRSQNPTNPLSSNSAAGNDDTLFKLLSVSGSDIHTSTDAADPINMEFKSPDSSTQSAYHRASVENSLSISGSGRVAAAGGGGGKDDIGRRWPRDEVLALINIRCNLFNKNGDPQHDKLEGSTKGPLWERISQKMMELGYKRSAKRCKEKWENINKYFRKTKDLNKKRSIDSRTCPYFHQLSNLYSQTTSSGVQGGGSTPSNDGTTTTTTTIMHNIASDQGNEGVVQAPSFDFEF*

Click here to download the sequence:
Link to NCBI Protein BLAST